Gene Rleg_5461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5461 
Symbol 
ID8016770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp43578 
End bp45887 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content57% 
IMG OID644827633 
ProductAAA ATPase 
Protein accessionYP_002978833 
Protein GI241518205 
COG category[R] General function prediction only 
COG ID[COG3950] Predicted ATP-binding protein involved in virulence 
TIGRFAM ID[TIGR02646] conserved hypothetical protein TIGR02646 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.323053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTA TTGACCGCAA CAGCGTGACC AATCCCCTTT CCGATGGAAC TGCCCTGGCG 
ATGAAGGTGG GCTTGGAGAA TCGCCGCGCT GCCGAATTCT TTTCCAGCCC GAGCAGGCAG
AGACGGTTCG ATTTCACGGT CTATCGGCAA TTCAAGCCGG CTCTCATGGC ACTCTTCTCA
AACAAATGCG CCTATTGCGA GAGCCCCTTC ATGAGCTCCG ACGGCGATAT CGAACAGTAT
AGACCCAAAT CATCAGTGGT CGAAGCACCC GACCATCCCG GTTACTGGTG GCTCGCCAAC
GACTGGAACA ACCTCCTGAT TGCCTGCCAC TTCTGCAATC GTACGGGCTC GCAAGTCGGC
GCGGATGGCA TTCGGGAGAT GATCGGCAAG GGGAACCGGT TTCCGATCCT TGGGTCACGC
GCGATGTCAC CCGCAGACGA TCTGGACGGG GAATTGCCTC TGCTTCTCGA TCCGACCCGT
GACCGACCGG AAACACATCT CGTCTATTCC GAAAGCGGAT ATGTCAGCAG CGAAACGGAA
AGAGGCAACA TCACAATCTC GCTCCTCGGC CTCAATCGTC CGGCCCTCGT TCAGCAGCGG
GCCGAAACGC TTCGCCGTTA CCGTGACCTA TTCCAGACGG CCGAAAAGCT TTTGACAACC
GAAGGGCCGT TCGAGAGTGA TATTGCCTAT CGAATGCGCG ATGACGCTCA ACAGATGGCA
TCTTACCAGG CTCCTTACGC CGCGATCGTG CGGCAATTCA TGCAGGCCGA CCTGAGGCGA
CTGACAAGCG CCCATGGCCA ATCGAGCAGC GAGGTTGTCC CCGTGCTCAG CTCGTTGCAG
ACATTTCAGT CCGTCTCAAG CACGGCGACG CCTGCGCGGC AGAAGCGAGC CGAAAAAACC
TCGCGGGACT TTCGCCAGCG AATGGCGGAC TATTCGCTTT CCACAGAAGA TGGCATCCGG
CGTTACAAGT CGCAGCGACG AGTGATCGAG AAGATCTCGA TACGCAACAT TCGCGCACTT
TCCGAAATCA ACGTAAACCT CGTAGCGATG GAATCCGCTC CCGGAGGCTG GCTGATGCTG
CTTGGCGAGA ACGGCACCGG CAAGAGCACG GCGCTACAGG CAGTCTCGCT GGTATTGGCA
GGTTCGGCCA ACGTCGTCGG CCTAATCAAG AGCGGAACGC TTGAATTGCG TGACCTCGTC
AGGTCCGGTG CGCGCTCCGG CCATGTCGAA ATCAAGCTAA GCGGTTTCGA CAAGCCGCAC
AGGCTAACCG TCTTCAGAAA CCGACTGGAG TTTTTCGCAC CGAGCGGGGA GAAAACGATC
ATAACGCGCA GCGGTACCGT CGAAGGAACC TCCTGGATTC CACAGACTGT ATTTGTTGCC
TATGGCGCCA CCCGCCTGCT TCCGCGAGAC AACGCCTTGA CCAATGATCC CGACGAATAC
GCCCGGATCG ATAATCTCTT CGATCCGTTC GTTCCGCTGA TCGATGCCCA GCAATGGCTT
TCAAAGCTCC CCGCAAATTA TTTCGATCGG GCTGTGCGCG TGTTGCGGGA TCTCCTTGCG
ATCAAGGAGG AGGACACTTT CTTCAAGCGC GCGGGCAAGA TCGCGGTCAG GACAAGCGGC
GGTTCCTCAA TACCGGTCAG CCGGTTGAGT GACGGCTACC AAACGGTATT TGCCGCGACC
CTCGACATCC TTGAAATGCT GTACAGGATC TGGCCGAACT TGGAGGACGC CGAAGGAATC
GTGCTCATCG ACGAGATCGA TGCGCACCTC CATCCTGCTT GGCAGATGCA GATCGTCGGT
CGATTGCGTC GCGCCCTTCC GGGGGTGCAA TTCATCGCGA CCACGCATCA GCCGTTATGT
CTCAGGGGAA TCCGAGCCGG GGAAGTCGCC GTGATGCGGC GCCTGGGGGA TGGACAGATC
GAGGTCGTTA GCGACCTCCC CTCACCCGAG GACTTCCTCG TCGAGCAACT CCTGACATCG
GAATTTTTTG GGTTGAATTC AACGGTGGAT CCGAAGACCG AAGAAGATTT CGACCGCTAC
TACATGTTTT TGGCCATGGA AGAGCGAAGC GAAGAGCAGG AACGTGAGCT AAGTGCGCTG
ACAATCTCGC TTCATGATCG AAGACAGCTT GGAACGACCC GGCGTGAAAG CCTCTATCTT
GCCGCTATCG ACAAGATCAT CGCGGAGCAG AAGACAAGGC CGTATCAACC ACACCAAATG
GTACAGGAAC TGGCGGTCAG AGAAATTTCC GAGATTTTCG ATAACCTGGT TGATGAGTTG
GACAACGAAG CCGGCGGAGA CAGGGTTTGA
 
Protein sequence
MIFIDRNSVT NPLSDGTALA MKVGLENRRA AEFFSSPSRQ RRFDFTVYRQ FKPALMALFS 
NKCAYCESPF MSSDGDIEQY RPKSSVVEAP DHPGYWWLAN DWNNLLIACH FCNRTGSQVG
ADGIREMIGK GNRFPILGSR AMSPADDLDG ELPLLLDPTR DRPETHLVYS ESGYVSSETE
RGNITISLLG LNRPALVQQR AETLRRYRDL FQTAEKLLTT EGPFESDIAY RMRDDAQQMA
SYQAPYAAIV RQFMQADLRR LTSAHGQSSS EVVPVLSSLQ TFQSVSSTAT PARQKRAEKT
SRDFRQRMAD YSLSTEDGIR RYKSQRRVIE KISIRNIRAL SEINVNLVAM ESAPGGWLML
LGENGTGKST ALQAVSLVLA GSANVVGLIK SGTLELRDLV RSGARSGHVE IKLSGFDKPH
RLTVFRNRLE FFAPSGEKTI ITRSGTVEGT SWIPQTVFVA YGATRLLPRD NALTNDPDEY
ARIDNLFDPF VPLIDAQQWL SKLPANYFDR AVRVLRDLLA IKEEDTFFKR AGKIAVRTSG
GSSIPVSRLS DGYQTVFAAT LDILEMLYRI WPNLEDAEGI VLIDEIDAHL HPAWQMQIVG
RLRRALPGVQ FIATTHQPLC LRGIRAGEVA VMRRLGDGQI EVVSDLPSPE DFLVEQLLTS
EFFGLNSTVD PKTEEDFDRY YMFLAMEERS EEQERELSAL TISLHDRRQL GTTRRESLYL
AAIDKIIAEQ KTRPYQPHQM VQELAVREIS EIFDNLVDEL DNEAGGDRV