Gene Rleg_6275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6275 
Symbol 
ID8016146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp341840 
End bp342826 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID644827578 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_002978778 
Protein GI241258894 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.564147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGA ATGCGAAAGT TGCCGTGACG CTCGGCGATC CGGCCGGCGT CGGCCCCGAG 
GTGATCGTCA AGGCCTTGGC AGCCCTTCCG AGGGAAGAGC GCCGCGATTT CGTGATCGTC
GGCAATGTCG AAGCGCTGGA GCGCGCCGAC CGCGTCACCG GCACCGGACT GCGGTTCGGG
CCTGCGGATG CACCCGGTGA CGACAGGATC GCCGTCGACG AAGTGGCGCT CGGTGCGGCT
CTACCTGAGA TCGGCAAGGT CAGCCCCGTC GCCGGCGATG CCTCGGTGCG CTACATCACC
CGCGCCGTCG ATTTCGCCAT GTCGGGTCAA GCTGACGTCA TCGTGACCGC GCCGATCAAC
AAGGAGGCGA TGAACCTCGC CGGCCATCAC CATGACGGCC ATACCGGGCT GCTCGCGCAT
CTCACCGGCT CGAAGAGCTC CTTCATGCTG CTTGCCTCCG AGCGGCTGAA CACCATCCAC
GTCTCCACCC ATATCTCGCT GAAGGGTGCG ATCGAGCGCG CCAAGACCGA GCGTGTTCTG
GCCACCATCG AAGCTGGCCA TCGACACTTC CTGCGGCTTG GCAAAACAGC GCGCATCGCC
GTCGCCGGCC TCAATCCCCA TTGCGGCGAA AACGGCCTGT TCGGCACCGA GGATACGGAA
TTCCTGGCGC CCGCCGTCGA GCAGGCGCAG GCAAAGGGCA TCGACGTCGT CGGTCCGATC
TCCGCCGATA CGGTGTTTGC CCGCGCCTAT AACGGCGCCT TCGATCTCGT CATCGCCCAG
TATCACGACC AGGGCCATAT CCCGATCAAG CTCGTTGCCT TCGACACGGC GGTCAACGTC
TCGCTCGGCC TGCCGATCGA CCGCGTCTCG GTCGATCACG GCACCGCCTT CGACATCGCC
GGCACTGGCA AGGCAAACCA CGTCAACATG CTGTCGGCCA TCGCCTATGC CAGGCTGATG
GCCCGCTCGC CGCGGCAGAG AGCGTGA
 
Protein sequence
MDRNAKVAVT LGDPAGVGPE VIVKALAALP REERRDFVIV GNVEALERAD RVTGTGLRFG 
PADAPGDDRI AVDEVALGAA LPEIGKVSPV AGDASVRYIT RAVDFAMSGQ ADVIVTAPIN
KEAMNLAGHH HDGHTGLLAH LTGSKSSFML LASERLNTIH VSTHISLKGA IERAKTERVL
ATIEAGHRHF LRLGKTARIA VAGLNPHCGE NGLFGTEDTE FLAPAVEQAQ AKGIDVVGPI
SADTVFARAY NGAFDLVIAQ YHDQGHIPIK LVAFDTAVNV SLGLPIDRVS VDHGTAFDIA
GTGKANHVNM LSAIAYARLM ARSPRQRA