Gene Rleg_6267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6267 
Symbol 
ID8016138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp332215 
End bp333207 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID644827570 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002978770 
Protein GI241258886 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.787873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTC AACCGCTGCT CAAGATCGAA AACCTGGTCA AGCATTTCCA CGTCAAGCTC 
GGCGCCTTCG GCGAACGCTC GGCAACCGTC TATGCCCTCG ACAATGTCAA TCTCGACATC
ATGGAAGGCG AGACGCTGAG CCTGGTCGGC GAATCCGGCT GCGGCAAGTC GACGACCGGT
TTCACCATCC TCAACCTCTA CAAGGCGACC AGCGGCAAGG TCGTCTACAA GGGCCAGGAT
CTCGCGACGC TCGACGAGAA GCAGATGCGG CCGTTTCGCC GCGACCTGCA GATCGTCTTC
CAGGATCCCT ATTCGACACT CAATCCGCGC ATGACGGTGG GCGAGGCGAT CGGCGAGCCG
ATCCTCTTCC ACAAGCTCTG CACCAAGGCC GAGCTGAAGG ACAGGGTGAC GACACTGCTC
ACCGATGTCG GCCTGCCGAC GCGGTTTGCC CAGCGCTACC CGCACGAGCT TTCCGGCGGT
CAGCGCCAGC GCGTCGTCAT TGCCCGCGCG CTCGCCTGCC AGCCGAAATT CATCGTCTGC
GACGAGGCGA TTTCGGCGCT CGACGTGTCG ATCCAGGCGC AAATCATCAA CCTGCTGCTC
GATCTGCAGG AAAAATACGG GCTGACCTAT CTCTTCATCG CCCATGATCT CGCGGTCGTG
CGCCATATCA GCACCCGTGT CGGCGTCATG TATCTCGGGC GGCTGGCCGA ACTTGCCACC
CGCGAGGAAC TGTTCGACAA TCCGCTGCAT CCCTATACCA GAGCGCTGCT GTCGGCCGTT
CCGGAGACCG ATCCGGAGCA TGAGCGCACG CGCCAGCGCC AGATCCTGCA GGGTGATGTG
CCGAGCCCGC TGAACCCGCC GACCGGCTGC CGTTTCCACA CGCGCTGCCC GATCGCCATG
GATGTCTGCA GCAAGGTGAT CCCCGCGTGG CAGGAAGCAA AACCCGGCCA TCTCGTCGCC
TGTCACGCCG TCAACACCGG ACAGACCGCA TGA
 
Protein sequence
MGAQPLLKIE NLVKHFHVKL GAFGERSATV YALDNVNLDI MEGETLSLVG ESGCGKSTTG 
FTILNLYKAT SGKVVYKGQD LATLDEKQMR PFRRDLQIVF QDPYSTLNPR MTVGEAIGEP
ILFHKLCTKA ELKDRVTTLL TDVGLPTRFA QRYPHELSGG QRQRVVIARA LACQPKFIVC
DEAISALDVS IQAQIINLLL DLQEKYGLTY LFIAHDLAVV RHISTRVGVM YLGRLAELAT
REELFDNPLH PYTRALLSAV PETDPEHERT RQRQILQGDV PSPLNPPTGC RFHTRCPIAM
DVCSKVIPAW QEAKPGHLVA CHAVNTGQTA