| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6247 |
|---|
| Symbol | |
|---|
| ID | 8016118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | - |
|---|
| Start bp | 310279 |
|---|
| End bp | 311337 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644827550 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002978750 |
|---|
| Protein GI | 241258866 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.670073 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA GTCAGACCAT ACGGTTCGCT ACAGCCGAGG ACGGCACCCG TATTGCCATG
GCCTCTTGCG GGCGGGGTCA GGTGATCCTG CGGGCGGCGC ACTGGCTGAG CCATGTCGAT
TACGATCTCG AAAGCCCGGT GTGGCGGCCG TGGCTCCAGG CACTGTCCGC CCACAACCGG
TTTGTACGCT ATGATCCGCG CGGCTGCGGC CTGTCGGACC GGCATGTCTT TGACCTCTCG
GTCGAAGCGT GGCACGCCGA CCTTGCTGCC GTGGCGGCGT CGATCGAGGA GCCGCGCTTC
GTCCTCCTCG GTCTTTCGCA GGGCGGCGCG CTCGCTATCG CATATGCCCT CAAATATCCC
GAGCGAGTAT CGCATCTGGT GCTTTTGAAC GCCTATGGTC AGGGTGCCCG CGCCAGAGCT
CAGACCGAGG CGGAGCGGCT GGAAGCCGAG ACCCTTGTCA ATTTCGTTCG CGTCGGCTGG
GGACGCGACA ATCCGGCGTT TTGCCGGTTC TTCACCAATC TCTTTATCCC CGACGGCACG
CCTGAACAGC ATCGCTGGTG GGGCGATCTC GAGCGGCAAA CGGCAACGGC CGACGTCGCC
GCACAACTGC TTTGGCAGAT GCAGGGGATC GATGTGCTGG ATCTTGCGGC GATGCTGAGC
GTTCCGACGT TGATCGTACA CAGCCGCGGT GACATGCGCG TGCCGTTTGA TCAGGGTTGC
AAGCTCGCCG CCGCGATTCC GGGCGCGAGC TTCGTGCCGC TTGAGAGCAA GAACCATGTG
CTCTTGCCGG ACGAGCCCGC GTGGAAGGTG TTTCAAACGG AACTTGCTGC CTTTCTCGGG
CAGGATCGGT CGGTGCGGCC GCGTGCGGTC AGTGAGGCCG GTCTGACACC CGCCGAGGCC
GCCCTTCTCG ACCTCGTTGC GGAGGGGCTA GACAACCGCG CGATCGCAGA ACGGCTTGGC
AAGAGTGCAA AGACCGTGCG AAACCAGCTG TCGGTGATAT TCAGCAAACT CGGCGTGCAT
AGCCGCTCGC AAGCGATCGT CGTCGCGCTC TCCCGATAG
|
|---|
| Protein sequence | MKLSQTIRFA TAEDGTRIAM ASCGRGQVIL RAAHWLSHVD YDLESPVWRP WLQALSAHNR
FVRYDPRGCG LSDRHVFDLS VEAWHADLAA VAASIEEPRF VLLGLSQGGA LAIAYALKYP
ERVSHLVLLN AYGQGARARA QTEAERLEAE TLVNFVRVGW GRDNPAFCRF FTNLFIPDGT
PEQHRWWGDL ERQTATADVA AQLLWQMQGI DVLDLAAMLS VPTLIVHSRG DMRVPFDQGC
KLAAAIPGAS FVPLESKNHV LLPDEPAWKV FQTELAAFLG QDRSVRPRAV SEAGLTPAEA
ALLDLVAEGL DNRAIAERLG KSAKTVRNQL SVIFSKLGVH SRSQAIVVAL SR
|
|---|
| |