| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6240 |
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| Symbol | |
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| ID | 8016165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 301403 |
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| End bp | 304711 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644827544 |
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| Product | Ti-type conjugative transfer relaxase TraA |
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| Protein accession | YP_002978744 |
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| Protein GI | 241258860 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.294548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.400802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ATCATCTCAG CATGAAGCCG ATCGCCCGCA GCGCTGGCCG TAGCGCTGTG
GCGTCCGCCG CCTATCGTGC GGCCGAGCGG CTGACGAACG AGCGTGATGG GCTAACCCAT
GATTTTAGCA ACAGGACAGG TGTCGAGCAT GCCGAGATCG TCTTGCCGAC TGGGTCTTCC
GCCTATTGGG CGATGAAGCG ATCGGCCTTG TGGAATGCCG CCGAGCGTGC CGAGAAGCGC
AGCGACGCCC GTATCGCCCG GGAATTCGAA GTCGCCCTGC CACACGAATT GAGTTCCGAC
CAGCGACTGG TGCTGACGCG GGCCTTTGCC GAAGATCTGG CCAATCGCTA TGGCGCTGCC
GTCGACTTCG CGATCCATCG GCCAGGTGGG GCAAGCGATA TCAGAAACAG CCATGCGCAT
CTGATGATGA CGACGCGTGA GGTGAGGGAA ACCGGTCTTG GCGACAAGAC GCTGCTCGAG
CGGGAGAACA GATGGCTTCT CGCCAATCAC CTGCCGCCAT CGCAACTGCA GCTGAAGGAT
CTCAGACAGG CGTGGGAGCA TCTTGCCAAC ACGCACCTTG AGAGGGCAGG CCACGATATC
CGCATCGATC ATCGCTCGCA TCTGGAGGCC GGGATCACGA TCGAGCCGAG CGAACATGTC
GGTGTGCATG CCACTCAGAT CGATCGCCAG GGTGGGGCAG TCTCTCGCGC GCGCCTCTCA
CCGCAATCGG CCGAGCGAAA TGCCGAGACC ATTCGCCGGC GCCCTGAAGA GATCTTGAAG
CTGATTACCA ACGAGAAGAG CGTCTTCAAC CGCTATGACA TTGCCAGGGC CTTGCATCGA
TACATCAACG ACGATGCGCA GACCTTCCAG AATGCTTTTG CATCGGTCAT GGCGTCGAAG
GCTCTCGTCG AGTTGAGGCC CGACAGTTCA AGCGTTCGCG GCCGCGATGG AGAGGCACGT
TATTCGACGG TCGAGATGGT GGCGATCGAG GGCGCGATGG CAACAGCCAC TGTTGCGATG
AAGGCGCGCC AAACCCACGG TGTGGCAAAG CGCAATGTCG ATGCGGCAAT CGCCGATCAG
GACAGATCGA TCCAGGCGGG AAATCCTTCA CCGGGGCAGG GGCTGTCGGC TGAACAGCGC
CAGGCGATCG AGCATGTCAC GGGTCCCGGT CAGATCGCCG TGGTGATCGG TTTTGCCGGT
GCCGGCAAGA GCACGATGCT GGCAGCTGCC CGCCAGGCCT GGGAAGCGCA GGGTTATCGC
GTTCATGGCG CGGCTCTGGC CGGCAAGGCC GCGGAAGGCC TGGAGCAATC GTCCGGCATA
TCGAGCCGCA CCTTGGCATC GTGGGAATAC AGCTGGCAGG CCGATCGCAG TCGGCTGAAT
GCTCGTGACG TCCTCGTCAT CGACGAGGGC GGCATGGTCG GCAGTCGTCA GCTCGCCCGC
TTCGTCGACG AGGTCAAACG GGCCGGCGCC AAGCTCGTCC TGGTCGGAGA TCATGAACAG
CTTCAGGCGA TCGGAGCGGG CGCGCCGTTT CGGGCAATCG CCGAAGCCGT CGGTCATGCG
CAACTGTCGG AAGTCCGACG TCAAAGAACC GATTGGCAAA AGCAGGCTTC GATTGACTTC
GCATCTCACC GGACCGCAGC CGGACTGTCG GCCTATGCTG CACGGGAAAA CCTTCATCTG
AAGACGGATC GCGCTGAAAC CCTGAAGGCG ATCATTGCCG ATTATGTCGC TGACCGATCG
GCCAATCCCA ACGACACGCG CATTGCGATG GCCCATCGGC GGATAGATGT GGCTGCCATC
AATGCCGGCA TTCGCTCTCG GTTGCAGGAG CGCGGTGAGC TCTCAAGAAG CACCGGCACC
TCGGATGATC GTGGTGAGGA GCTCACCTAC CAGACCAACA ATGGGAAGCG ATCCTTCGCA
CGCGGCGATC GCATCGTCTT CCTGGAGAAC GATCGTGATC TCGGCGTCAA GAATGGCATG
TTGGGCGAGG TGATCGCCGT CGCGCCGGAC GCAATACAGG TTCGGCTTGA CGGCAAGGCG
CAGACGCAAG ATGGGCAACG CCAGGTGACC GTACCGGTCA ATCGTTACCA ATCCTTTGAC
CACGGCTACG CAACGACGAT CCACAAGACG CAAGGCGCTA CCGTCGACCG GAGTTTTGTC
CTGGCGTCGA CGACGATGGA CCGGCATCTG ACCTACGTGG CGATGACCCG TCATCGCGAG
GCGGTGCAGC TCTATGCGGG GCTGGATGCG TTCAAGACGG AGCGATCCCT GACAGAGACA
CTGAGCCGCT CAGGCGTCAA GGAGACGACG CTTGACTATA CCCATGACTT TGCCAATCGG
CGCGGCATGG AGGATCGCCG GGGGCAGGGC GAGAGCGAGG TCGCACCTGC GGTAATCACC
AAGGAGGCGG AGCGCATCGC GGACACGACG GTTCCCAAGC CAATGCAAGA ACCACGGCCG
CCGACACCGC TCGCGGCCCG CAGCATCGCC GATGGCGGCT CTTCGCACCA GGATCCCACT
GGCGATGAAC GTCGCGATGA ACGCGAGGAT GAACGCCGCG TGCTCGTTGC GGCGGTTAAG
ACCTATGCGA TGAGCGTCGA AGAGGTCGGA CGATCAAAGG CGATGCCGGC ATTCGAACGT
GATTGGGCCG CGGCAAAGCA GCTCGCGCCG CAGGTGTTCA ACGACGCGCC AGCGGCAATG
GACGTGTTGC GCGGCCGCAT CCTGGATGAG AATGCAGATC CGGTCGCGCT TGCCAGTCAA
CTCAGCACTT CGCCCGAGAC GATCGGTGCG CTCGCCGGCA AAACCGGCCT GTTCGGAGAC
AACGCTGAAC GCAAACACGC GCTTTTGCGG ATCGATGCGC TGGCTTCGCA TATTCGCCAA
TCCGCCAACA CCTGGCAGCG TCGCCTTGCG GCTGAATGCG GCTCCGAACG CTGGAAACGA
GAAAAGCAGG ACGTCGTCGA GGTTCTGGGG CCGAGCCGCC GGAGTGAGGC GCTGCTGCGC
AATCTCGATG ATCTCCCTTA TAGCGACAAG GCAAAGTTCG TCGAACGACT GGCGGCGACA
CCGGAGGGCC GTCAGGCGCT TGCCGAGGCA AAGGACATCG CTACTGCGAT CGAAACGCGC
TTCGGTCGCG CCGATCCCTC AGATCTCGCG GATCAGCTGA AGCGAGTGGG ACCGGATCGG
GATGGTGACG TCGAGCGCAT CCGCCAGGTT GCTCGCCTTG CCGATCGCAG TCATCGTGCG
GAGCTCACCC AGCAGATGGA GTTGAAGCGG TCGCTGAAGC GGGGCAAGTC CTTGGGGCTT
GGGATGTAG
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| Protein sequence | MAIYHLSMKP IARSAGRSAV ASAAYRAAER LTNERDGLTH DFSNRTGVEH AEIVLPTGSS
AYWAMKRSAL WNAAERAEKR SDARIAREFE VALPHELSSD QRLVLTRAFA EDLANRYGAA
VDFAIHRPGG ASDIRNSHAH LMMTTREVRE TGLGDKTLLE RENRWLLANH LPPSQLQLKD
LRQAWEHLAN THLERAGHDI RIDHRSHLEA GITIEPSEHV GVHATQIDRQ GGAVSRARLS
PQSAERNAET IRRRPEEILK LITNEKSVFN RYDIARALHR YINDDAQTFQ NAFASVMASK
ALVELRPDSS SVRGRDGEAR YSTVEMVAIE GAMATATVAM KARQTHGVAK RNVDAAIADQ
DRSIQAGNPS PGQGLSAEQR QAIEHVTGPG QIAVVIGFAG AGKSTMLAAA RQAWEAQGYR
VHGAALAGKA AEGLEQSSGI SSRTLASWEY SWQADRSRLN ARDVLVIDEG GMVGSRQLAR
FVDEVKRAGA KLVLVGDHEQ LQAIGAGAPF RAIAEAVGHA QLSEVRRQRT DWQKQASIDF
ASHRTAAGLS AYAARENLHL KTDRAETLKA IIADYVADRS ANPNDTRIAM AHRRIDVAAI
NAGIRSRLQE RGELSRSTGT SDDRGEELTY QTNNGKRSFA RGDRIVFLEN DRDLGVKNGM
LGEVIAVAPD AIQVRLDGKA QTQDGQRQVT VPVNRYQSFD HGYATTIHKT QGATVDRSFV
LASTTMDRHL TYVAMTRHRE AVQLYAGLDA FKTERSLTET LSRSGVKETT LDYTHDFANR
RGMEDRRGQG ESEVAPAVIT KEAERIADTT VPKPMQEPRP PTPLAARSIA DGGSSHQDPT
GDERRDERED ERRVLVAAVK TYAMSVEEVG RSKAMPAFER DWAAAKQLAP QVFNDAPAAM
DVLRGRILDE NADPVALASQ LSTSPETIGA LAGKTGLFGD NAERKHALLR IDALASHIRQ
SANTWQRRLA AECGSERWKR EKQDVVEVLG PSRRSEALLR NLDDLPYSDK AKFVERLAAT
PEGRQALAEA KDIATAIETR FGRADPSDLA DQLKRVGPDR DGDVERIRQV ARLADRSHRA
ELTQQMELKR SLKRGKSLGL GM
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