| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6210 |
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| Symbol | |
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| ID | 8016222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 253317 |
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| End bp | 254759 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644827515 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002978715 |
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| Protein GI | 241258831 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.596847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.481561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGC ACATTAGAAA ACCCAGCGAA AACCTGCCGG TCCCTTCAGG CAAAGGCCCT
TCAGACAAGG GCCCTTCGGG GAAGGGCAGG GAGCTCACCG CCCGCCCGCC GTTGCCGCCG
GCAATTGCAG AATTCCAGTC CGACGCCGTC GAGCTGGAGG AACGCGCCCC GCCGCGCATT
GCAAGGATGA CGCTGTACTG CGTGACGGCG CTGATTGTTT CGGCGATCAT CTGGGCCTCG
GTCTCGTCGA TCGATGAGGT GGTGATTGCG CCCGGCAAGC TCGTCACCAC CCAGCCGACG
ATCGTCGTCC AGCCGCTCGA AACCTCGATC ATCCGCACGA TTGAGGTGAA GGTCGGCGAA
GTGGTGCATG CCGGGCAGAC GCTCGCGACC CTCGACGCCA CTTTCAGCCA GGCCGATGTC
GACCAGCAGC AGGCGAAGTT CTCCGCGCTC GACGCGCAGG TGAGGCGCAT CGAGGCCGAG
CTTGCCGGCG ACGACTACAC GAAGATGGCG GGAGATGCGC CCGACCAGGT GCTGCAGGCG
CAGCTCTTCG GCCAGCGACA GGCCTTCTAC ATGGCGCAGC TGCAGAATTT CGAGCAGCAA
ATCGCCGGCC AGTCGGCCGC TCTTGCGGCG AGCAGGAACC AGGAGGCCGT GCTCAACGAC
AGGCGCGATG GGCTCTCTCA GATCGAGGCA GCGCGGGAGC GGCTCTATAA CAAGCAGAGC
GGCTCGCTGA TCACGTTGCT CGGCTCGCGT GACGCTCGCC TTGACGTCGA GTCCGACCTG
ACCGCTGTCC GCGGCCGGGC AGACGAGGCC GCCCACGCCT ATGCCAAGCT CCGAGCCGAC
CGCCAGGCCT TCATCGAGGA TTTCCGCCGC GCCGCAATGG AGCAGCTGGT GGAACTGCGC
GGCCAGCGTG ACATGGCTGA CGAGGAACTG AAAAAGATGG AACTGCGCCG CAACATGGTG
GCGCTGACCG CACCCGCCGA TGCCGTCGTG CTCGATCTCG CCCACCGCTC GGTCGGTTCA
GTGGTGCGCG AGGCGGAACC GGTCGTGACG CTGGTACCGA TCAACGTGCC GCTCGAAGCC
GAAGTCTCGA TCAACACGCG CGACATCGGT CGCGTAGCCG TCGGCAAGGA AGCCCGCATC
AAGCTCGACG CCTATCCCTT CCAGAAATAT GGCACCGCCA CGGGCGAGGT GAGAACCATC
AGCCAGGACA CCTTCCTCAC CGGCCAACAG GAGCAAACAG AGACCCCGAG CCAGCCGGCC
GCCCCCTTCT TCAAGGCGCG GATCCTGCTT GCCGATACCC GGCTGAATGC AGCAGGCATG
CCGGTGCGGC TACTTCCCGG CATGACCGTG TCCACGGAAA TCAAGGTCGG CAACCGTACT
GTGATCTCCT ATTTCCTGTA TCCGCTGCTG CGTGGCCTCG ATAACGCAAT ACGCGAACCG
TAG
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| Protein sequence | MNAHIRKPSE NLPVPSGKGP SDKGPSGKGR ELTARPPLPP AIAEFQSDAV ELEERAPPRI
ARMTLYCVTA LIVSAIIWAS VSSIDEVVIA PGKLVTTQPT IVVQPLETSI IRTIEVKVGE
VVHAGQTLAT LDATFSQADV DQQQAKFSAL DAQVRRIEAE LAGDDYTKMA GDAPDQVLQA
QLFGQRQAFY MAQLQNFEQQ IAGQSAALAA SRNQEAVLND RRDGLSQIEA ARERLYNKQS
GSLITLLGSR DARLDVESDL TAVRGRADEA AHAYAKLRAD RQAFIEDFRR AAMEQLVELR
GQRDMADEEL KKMELRRNMV ALTAPADAVV LDLAHRSVGS VVREAEPVVT LVPINVPLEA
EVSINTRDIG RVAVGKEARI KLDAYPFQKY GTATGEVRTI SQDTFLTGQQ EQTETPSQPA
APFFKARILL ADTRLNAAGM PVRLLPGMTV STEIKVGNRT VISYFLYPLL RGLDNAIREP
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