Gene Rleg_6195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6195 
Symbol 
ID8016208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp239887 
End bp240777 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID644827501 
Productproline-specific peptidase 
Protein accessionYP_002978701 
Protein GI241258817 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.816289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGTG AAATACGGCC GGACGAGCGA TTCGAGATCG ATGTCGATGG CTATCGCGTC 
GTTGCCTATA GTTTCGGGAC CGGCAGCGAG ACGGTTTTCT GCCTGAACGG CGGGCCGGGT
CTGCCCTGCG ATTACCTGCG CGAGGCGCAT TCCTGTCTCA TCGACAAGGG CTATCGCGTC
GTCGCCTTCG ACCAACTCGG CACCGGCGCT TCCGACCGGC CGGACGATCT CTCGCTCTGG
ACGATCGGCC GTTATGTCGA AGAGACGGAG ACGGTGCGCA AGGCGCTGGG GCTCGGCAAG
GTCCACATGC TCGGCCATTC CTGGGGCGGC TGGCTGGCGA TCGAATACGC GGTGACCTAT
CCCGAAAACC TCAAGACGCT GATCCTCGAA GATACCGTCG CCGATATGCC GCATCTGATC
TCGGAACTGG AACGGCTGCG CGCGGCACTC GGTCCCGAAA CTGTCTCGAT GATGCAGAAG
CACGAGGCGC AAGGCACCTA CAATCATCCG GAATATCTCG CCGCCGTCAC CATCCTCAAC
TACCGCCATG TCTGCCGTCT GCCGGAATGG CCGGCGCCGG TGCGCCGCTC GCTCGACGAT
TGGAACATGG CGCCCTATGA GACGATGCAG GGGCCGAACG AGTTTCTCTA TATCGGCAAC
CTCAAGGACT GGAACCGTAT ACCCGACCTG CCGCGGCTGA CGCTGCCGGT GCTCATCACG
ACGGGAGAAC ATGACGAGCT GACGCCGGCC TGTGCGCTGA GGATGAAGCT TGCGCTGCCG
AATGCCGAGC TGAAGGTATT TGCCAATGCC AGCCACATGC CGTTCTATGA GAACCCGCAG
GATTATTATC CGGCGCTTCT CGATTTTCTC GCCCGGCACG AGGCAGGCTG A
 
Protein sequence
MWREIRPDER FEIDVDGYRV VAYSFGTGSE TVFCLNGGPG LPCDYLREAH SCLIDKGYRV 
VAFDQLGTGA SDRPDDLSLW TIGRYVEETE TVRKALGLGK VHMLGHSWGG WLAIEYAVTY
PENLKTLILE DTVADMPHLI SELERLRAAL GPETVSMMQK HEAQGTYNHP EYLAAVTILN
YRHVCRLPEW PAPVRRSLDD WNMAPYETMQ GPNEFLYIGN LKDWNRIPDL PRLTLPVLIT
TGEHDELTPA CALRMKLALP NAELKVFANA SHMPFYENPQ DYYPALLDFL ARHEAG