Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6195 |
Symbol | |
ID | 8016208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 239887 |
End bp | 240777 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827501 |
Product | proline-specific peptidase |
Protein accession | YP_002978701 |
Protein GI | 241258817 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.816289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGCGTG AAATACGGCC GGACGAGCGA TTCGAGATCG ATGTCGATGG CTATCGCGTC GTTGCCTATA GTTTCGGGAC CGGCAGCGAG ACGGTTTTCT GCCTGAACGG CGGGCCGGGT CTGCCCTGCG ATTACCTGCG CGAGGCGCAT TCCTGTCTCA TCGACAAGGG CTATCGCGTC GTCGCCTTCG ACCAACTCGG CACCGGCGCT TCCGACCGGC CGGACGATCT CTCGCTCTGG ACGATCGGCC GTTATGTCGA AGAGACGGAG ACGGTGCGCA AGGCGCTGGG GCTCGGCAAG GTCCACATGC TCGGCCATTC CTGGGGCGGC TGGCTGGCGA TCGAATACGC GGTGACCTAT CCCGAAAACC TCAAGACGCT GATCCTCGAA GATACCGTCG CCGATATGCC GCATCTGATC TCGGAACTGG AACGGCTGCG CGCGGCACTC GGTCCCGAAA CTGTCTCGAT GATGCAGAAG CACGAGGCGC AAGGCACCTA CAATCATCCG GAATATCTCG CCGCCGTCAC CATCCTCAAC TACCGCCATG TCTGCCGTCT GCCGGAATGG CCGGCGCCGG TGCGCCGCTC GCTCGACGAT TGGAACATGG CGCCCTATGA GACGATGCAG GGGCCGAACG AGTTTCTCTA TATCGGCAAC CTCAAGGACT GGAACCGTAT ACCCGACCTG CCGCGGCTGA CGCTGCCGGT GCTCATCACG ACGGGAGAAC ATGACGAGCT GACGCCGGCC TGTGCGCTGA GGATGAAGCT TGCGCTGCCG AATGCCGAGC TGAAGGTATT TGCCAATGCC AGCCACATGC CGTTCTATGA GAACCCGCAG GATTATTATC CGGCGCTTCT CGATTTTCTC GCCCGGCACG AGGCAGGCTG A
|
Protein sequence | MWREIRPDER FEIDVDGYRV VAYSFGTGSE TVFCLNGGPG LPCDYLREAH SCLIDKGYRV VAFDQLGTGA SDRPDDLSLW TIGRYVEETE TVRKALGLGK VHMLGHSWGG WLAIEYAVTY PENLKTLILE DTVADMPHLI SELERLRAAL GPETVSMMQK HEAQGTYNHP EYLAAVTILN YRHVCRLPEW PAPVRRSLDD WNMAPYETMQ GPNEFLYIGN LKDWNRIPDL PRLTLPVLIT TGEHDELTPA CALRMKLALP NAELKVFANA SHMPFYENPQ DYYPALLDFL ARHEAG
|
| |