Gene Rleg_6194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6194 
Symbol 
ID8016207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp238897 
End bp239835 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID644827500 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978700 
Protein GI241258816 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.856468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCT ATAAATTCGT TCTGACGCGA CCGCTGCAGT TCCTGCCCGT CATCTTCGGC 
ATCAGCGTCA TCACTTTCAT TCTGGTCCGG TTGATCCCCG GTGATCCGGC GCGCAACATC
CTCGGCACGC GCGCGACGCC GGCAGCCCTT GCCAGTATCC GCGCCCAGTA TGGGCTCGAC
CAGCCGATGT GGCTGCAATA TGTCTATTTC CTCAAGAACC TCGCCAATGG CGAGATGGGC
AAGTCGATCC TCTACAAGAT CGACGTGCTG AAGCTGATCG TCACCCGCAT CGAGCCGACG
CTTGCGCTCG TCGTCTCCAG CGTCGTGCTT TCGGTCCTGA TCGCGGTACC GATGTCGGCG
ATCGCCGCAC GCAATGCCGG CCGGGCGCCG GATCATGCGG TGCGCATCGT CTCGACCTTC
GGCATCGGTT TTCCGCCCTT CTGGCTGGGG CTGATGCTGA TCATCCTGTT CAGCGTCGAA
CTCGGCGTGC TGCCGGTTTC GGGCTATGGT GCGACGATCG GCGAAAAGCT GTCGCATCTC
GTGCTGCCGA GCCTGACGGT CGCGCTGTCG CTCTCGACCG TGCTGACGCG CAGCCTGCGG
GCGGCGATGA TCGAGCAACT GAAATCGGAT GTCGCGACGG CGGCGCGCGC CCGCGGCATG
CCGGAGGGGA TCGTCTTCTG GCGGCATGTG CTGCCGAATT CACTGGTGCC GACGATCAAT
CTGCTTGCTG TCAACATCGG CTGGCTGATC GGCGGCACGG TGGTGGTCGA GAGCGTCTTT
GCGCTGCCCG GCATGGGACA GCTGCTGGTC AGGGCGATCT TCTCACGCGA CTACATGGTG
GTTCAAGGCG TCGCCATGGT CTTTGCCTGC GCCACCGTAC TCATCAACTT CATTGCCGAC
ATCGTCACTG TCGCCGTCGA TCCGAGGGTG AAGCTATGA
 
Protein sequence
MHRYKFVLTR PLQFLPVIFG ISVITFILVR LIPGDPARNI LGTRATPAAL ASIRAQYGLD 
QPMWLQYVYF LKNLANGEMG KSILYKIDVL KLIVTRIEPT LALVVSSVVL SVLIAVPMSA
IAARNAGRAP DHAVRIVSTF GIGFPPFWLG LMLIILFSVE LGVLPVSGYG ATIGEKLSHL
VLPSLTVALS LSTVLTRSLR AAMIEQLKSD VATAARARGM PEGIVFWRHV LPNSLVPTIN
LLAVNIGWLI GGTVVVESVF ALPGMGQLLV RAIFSRDYMV VQGVAMVFAC ATVLINFIAD
IVTVAVDPRV KL