| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6179 |
|---|
| Symbol | |
|---|
| ID | 8016192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | - |
|---|
| Start bp | 224030 |
|---|
| End bp | 225562 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644827485 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002978685 |
|---|
| Protein GI | 241258801 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0516562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.382229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC CCGTGCTGGA AATTATCGGC GTCAGCAAGC GCTTCGGCGA CAATCTCGCC
AATCACGATA TTTCCATGAC GCTCGCCAAG GGTGAGGTCG TCGCCCTGCT CGGCGAGAAC
GGTGCGGGCA AGACCACGCT GATGAGTATC CTTTTCGGCC ATTACATGCC GGATGCAGGC
CGAATCCTGA TCGAGGGCAC GGAGGTGCCG CAGGGCAAGC CGCGTGCGGC GATCCGCGCC
GGCGTCGGCA TGGTGCATCA GCATTTTTCG CTCGCGCCCA ATCTGACCGT TCTCGAAAAT
GTCATGACCG GCACGGAAAG ACTGTGGTCC TGGCGCTCGG CGACGTCGGC GGCGCGGAAG
AAGCTGCTCA CAATTTCCGG ACGCTTCGGC CTCAAGGTCG ATCCGGATGC CCGCCTTGGC
GACCTGTCGG TCGGCGAGCA GCAGCGCGTC GAGATCCTCA AGGCGCTCTA TAACGATGCC
CGCATCCTGA TCCTCGACGA GCCGACGGCA GTGCTGACCA ATATCGAAGC CGAACGGCTG
TTCACGACGC TGAGGGAAAT GGCCCACCAA GGCCTGTCGC TGATCTTCAT CTCCCACAAG
CTCGACGAGG TCATGGCCGC CGCCGACCGC ATCGTCGTGC TGCGCGGCGG CAAGATGGTC
GCCGAACGAA AGGCGTCGGA AACCAGCAAG GCGGAACTCG CCGAACTGAT GGTTGGCCGC
CGCGTGACGC GGCCTGTACG AGAGCCGTCG ACACCGGGTG CCGTTGCCCT CGAAGCTTCA
GGTGTGACGG TGCGTATCGA CGGCGTCGAT CGATTGAAAT CGATCAGCTT CCGGCTGCAC
CAGGGCGAGA TCCTCGGCAT CATCGGTGTT TCCGGCAATG GCCAGGCGGC ACTGGCGCAT
CTTCTCTCCG GCACGCTGGC GCGGAGTGCC GGCGACCTTA TGCTTTTCGG GGAAGCCATC
GGCAATCTCG GCGTCGCCGA TGTGGTCGAT GCCGGCATCG GACGCATTCC CGAGGACCGC
AACGAGGAGG GCGTGATCGG CGAAATGGCG ATCTGGGAAA ACGCCGTGCT GGAGCGCCTC
GCCTCGCCTG CCTTTTCGCG CCATGGCCTC GTCAACCGCA AGGCGGGCAT GGCCTTCGCG
AGCGAAATTA TCGACGGGTT CGATGTCCGC GGCGGCGGCC CTGCCATCCG CACCCGGCTG
CTCTCCGGCG GCAATATGCA GAAGCTCATT CTCGGCCGCA ACCTGCATCG GCGGCCGCGT
ATCCTGATCG CTGCGCAGCC GGCGCGCGGC CTCGACGAAG GGGCCGTGGC GGCCGTGCAC
GCACGCCTGC TCGAAGCCCG CCGGCAGGGC ACCGCCGTGC TGCTGATCTC GGAAGACCTC
GATGAGGTGA TCGCGCTTGC CGATCGCATA CAGGCGATCG TTGTCGGCCG TCTGTCCCCG
CCCGTCGAGG CTGACGGCGC CGACGCCCGC AGGCTGGGGC TGATGATGGC CGGCGAATGG
CAGGAAACCC CAGAGGTCGG CCATGCGATT TGA
|
|---|
| Protein sequence | MTGPVLEIIG VSKRFGDNLA NHDISMTLAK GEVVALLGEN GAGKTTLMSI LFGHYMPDAG
RILIEGTEVP QGKPRAAIRA GVGMVHQHFS LAPNLTVLEN VMTGTERLWS WRSATSAARK
KLLTISGRFG LKVDPDARLG DLSVGEQQRV EILKALYNDA RILILDEPTA VLTNIEAERL
FTTLREMAHQ GLSLIFISHK LDEVMAAADR IVVLRGGKMV AERKASETSK AELAELMVGR
RVTRPVREPS TPGAVALEAS GVTVRIDGVD RLKSISFRLH QGEILGIIGV SGNGQAALAH
LLSGTLARSA GDLMLFGEAI GNLGVADVVD AGIGRIPEDR NEEGVIGEMA IWENAVLERL
ASPAFSRHGL VNRKAGMAFA SEIIDGFDVR GGGPAIRTRL LSGGNMQKLI LGRNLHRRPR
ILIAAQPARG LDEGAVAAVH ARLLEARRQG TAVLLISEDL DEVIALADRI QAIVVGRLSP
PVEADGADAR RLGLMMAGEW QETPEVGHAI
|
|---|
| |