Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6178 |
Symbol | |
ID | 8016191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 222991 |
End bp | 224040 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644827484 |
Product | inner-membrane translocator |
Protein accession | YP_002978684 |
Protein GI | 241258800 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00223379 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.248312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTTG AACGCCGCGA GCACCGCCCG CTTTACCTGC TGATCGTCAC GCCCGTCATC GCGGTCATCG CAGCGTTGGC GCTGGCAGGC ATCTTGATCG CCATTGCCGG CGCGCCTGTT CTCGATGCCT ATTGGCGCAT CCTGACAGGC GCTTTCGGCT CGCGGCTCTC GGCGACCGAA ACGCTGACGC GGGCAACGCC GCTGATGCTG ACGGGGCTTG CCGCCGCCGT CGCTTTCCGG GCGCGGCTCT GGAATATCGG CGCCGAGGGC CAGTTCTATC TCGGCGCCAT CGCCGTTGCC GCGGCAAGCT CGAAGCTGCT CGGCAATCTT CCCGCCCCCA TCCTCATTCC GCTGCTGTTG CTGGTCGGCG CCATTGCCGG CATGGTGCTG ATCCTGATCC CGCTCTGGCT CAGGCTGCGC TTCTCCGTCG ATGAGGTCGT CACCAGCCTG CTCCTGAATT TCATCGCTGT GCTGTTCGTC TCGATGCTGA TCGACGGCAT CCTCAAGGAT CCGCTGGCCT TCGGCTGGCC GCAGTCGCAA TCCGTCAGCG ATCACGCCAT GCTGCCGAAG CTGGTCGCCC GCTCGCGCCT GCATATCGGC TTTGCGATCG CGATCGCTCT GGCCGTCGTC GTCCATTTCG TCCAGTCCCG CACCGTGTTC GGCATGCAGT CGCGCGCAGC AGGTCTCAAT CCCGGCGGGG CCGTCTTTGC CGGCGTCCCG CTCGGCAAAA CGTTGGTGAA GGTCGCCTGT CTCTCCGGTG GGCTTGCGGG GTTGGCGGGA GCGATCGAGG TCATGGGCGT CAAGGGTTAT GTGACGACCG ATCTGTCGCC GGGCTTCGGT TATGCCGGTA TTGTTGTCGC CATGCTCGCC AACCTCAATC CACTCGGTGT CGTCTTCGCC GCCATTTTCA CCGCCACCAT GTTCGTGGGG GCGGACGGCA TGAGCCGCGG TCTCGGCATC CCGACCTATA TCGCCGATGT CACGGTTGCC CTGTCGCTGC TGACGATGCT GATCGCCTTG TTCTTCACGC AATACAGGAT CCGGCGATGA
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Protein sequence | MRFERREHRP LYLLIVTPVI AVIAALALAG ILIAIAGAPV LDAYWRILTG AFGSRLSATE TLTRATPLML TGLAAAVAFR ARLWNIGAEG QFYLGAIAVA AASSKLLGNL PAPILIPLLL LVGAIAGMVL ILIPLWLRLR FSVDEVVTSL LLNFIAVLFV SMLIDGILKD PLAFGWPQSQ SVSDHAMLPK LVARSRLHIG FAIAIALAVV VHFVQSRTVF GMQSRAAGLN PGGAVFAGVP LGKTLVKVAC LSGGLAGLAG AIEVMGVKGY VTTDLSPGFG YAGIVVAMLA NLNPLGVVFA AIFTATMFVG ADGMSRGLGI PTYIADVTVA LSLLTMLIAL FFTQYRIRR
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