Gene Rleg_6160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6160 
Symbol 
ID8016173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp206870 
End bp207892 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID644827466 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002978666 
Protein GI241258782 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00050807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGG GAACGACACC AAGTCTGAAG GATGTTGCGG CAGCGGCCGG CGTGTCGGTC 
ACCACCGTGT CGCGTTTCGT CAATGGCAGT CTCGATCTTC CCTTTCAGAC CAAGAAGCGC
ATCGAGGATG CGATCAAGAC GCTGAACTAC CGGCCGAACC CGCATGCGCG TCGCTTAAGC
AGGGGGCGCT CGGATACGAT CGGCCTCGTC GTGCCCGATA TCGCCAATCC CTTCTTCGCG
ACGCTCGTCG CCGCCGTGGA GCAGGCGGCC GATGAAAAGA AGCTCGCGGT CTCCTTGCAC
GCCACCCTCA ACCGGCCGGG ACGCGAGATT GAATATCTGC AGCTGATCGA GCGCAATCAC
GTCGACGGTC TGATCTTCGT CACCAACCAC CCCGACGATG GCGCGCTTGC CGCGCTGATC
AACGGCAGCG GCAAGGTTAT TATCGTCGAT GAGGACATTC CCGATTCGAA GGCGCCGAAG
CTATTCTGCG ACAATGAGCA GGGCGGCTAT CTCGCCGGTC AGCACCTAGC CGAACAAGGC
CATCGCCATG TCCTCTTCAT CGGCGGCGAC GAGCGTATGA TCAGTGCCCG CAGGCGCTAT
GACGGCCTGC TGAAGGCGCT CAGGGAGCGG CATGGCGGCG AGGCCCGAGC CGATCGCTAT
GCCGGCGAAT ATACGATCGA ATATGGCCGT GCGGCGGCAC TCGACTATCT CTCCGGAGAC
CGAAAAGCGA CGGCGATCTT TGCCAGCTCC GACGAGATCG CCATCGGGCT GGTCGAGGTC
TTCAGAAGCC GAGGCGTCTC GATCCCAGGC GACATCTCAG TCATCGGCTT CGACGACGTC
GGTCCGCTTC ATCTCTTTGC GCCGCCGCTG ACGGCCATCC GCCAGCCGGT GCGTGAGATC
GGCCGGCGGT CGCTGGAGCT GCTTCTGGAA ACCAATTGGC ACGAGTGGAA ACCATCCGCC
TCGGAAGAAC TCCTGCCTGT CGAAATCGTG GTGCGGAACT CCGTTGCGCC GCCTGCGAAA
TAA
 
Protein sequence
MAKGTTPSLK DVAAAAGVSV TTVSRFVNGS LDLPFQTKKR IEDAIKTLNY RPNPHARRLS 
RGRSDTIGLV VPDIANPFFA TLVAAVEQAA DEKKLAVSLH ATLNRPGREI EYLQLIERNH
VDGLIFVTNH PDDGALAALI NGSGKVIIVD EDIPDSKAPK LFCDNEQGGY LAGQHLAEQG
HRHVLFIGGD ERMISARRRY DGLLKALRER HGGEARADRY AGEYTIEYGR AAALDYLSGD
RKATAIFASS DEIAIGLVEV FRSRGVSIPG DISVIGFDDV GPLHLFAPPL TAIRQPVREI
GRRSLELLLE TNWHEWKPSA SEELLPVEIV VRNSVAPPAK