| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6159 |
|---|
| Symbol | |
|---|
| ID | 8016172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | + |
|---|
| Start bp | 205545 |
|---|
| End bp | 206615 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644827465 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002978665 |
|---|
| Protein GI | 241258781 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000217186 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC AGATCGAGCT CAGAGGCGTC AACAAATATT ACGGCGCCTT CCACGCCCTG
AAGAACATCG ACCTTTCGAT CGCCAAGGGC ACTTTCGTCG CGCTCGTCGG CCCCTCGGGC
TGCGGCAAGT CCACGCTGCT GCGCTCGCTT GCCGGCCTCG AAAGCATTTC GTCGGGCGAT
CTCAGGATTG CCGGCGAGCT GATGAACGGC GTGCCACCAC GCAAGCGCGA CGTCGCCATG
GTGTTCCAGT CCTATGCCCT CTATCCGCAT ATGACGGTCG AGGAGAACCT GACCTACAGC
CTGCGCATTC GCGGCATCGC CAAGGCCGAG GCCAAGAAGG CGGCCGAGGA CGTAGCGGCG
ACGACGGGTC TTTCGCATCT CCTGAAGCGC TATCCGCGCG AGCTCTCTGG CGGTCAGCGC
CAGCGCGTCG CCATGAGCCG CGCCATCATC CGCCATCCCA AGGCCTTCTT GTTCGACGAG
CCGCTGTCCA ATCTCGATGC TGCGCTGCGC GTCCACATGC GCAAGGAAAT CCGGTCGCTG
CACGACCGGC TGCACGCAAC CTTCGTCTAC GTCACGCACG ACCAGGTCGA AGCGATGACG
ATGGCCGACC ATGTGGTGGT GATGCGCGAC GGCATCATCG AACAGCAAGG CGCGCCGCTC
GACCTCTACG ACCGGCCGGC GAACCGGTTC GTTGCCGGCT TCATTGGCTC GCCGGCCATG
AATTTCATTC CCGCGATCGC CGCGGAAGAC GGCAAGAGCC TGATCCTGGA CTTCGGCGCG
GTGAAGCAGA CGCTTGCGAT ATCACGTGCC ATCGAACCCG GCCGCAAGCT CATCGCCGGC
ATCCGGCCGG AGCACATCGG CGTCGTCGAG CCCGGCCATG GCAGCTTCGA CGTGCCGATC
GCCTTCGTCG AATCGACGGG CTCGTCGACC TTCATCGTCG CGGAGACCCA GCCGGAACTG
ACAATCGTCG AGACGCGCCG CGACAGGGTC AAGGCAGGAG ACATGATCGG ACTTTCGGTC
GATCCGGGCC AGGTCCATCT CTTCGACGCG TCGACGGATC ACCTCATATA A
|
|---|
| Protein sequence | MTTQIELRGV NKYYGAFHAL KNIDLSIAKG TFVALVGPSG CGKSTLLRSL AGLESISSGD
LRIAGELMNG VPPRKRDVAM VFQSYALYPH MTVEENLTYS LRIRGIAKAE AKKAAEDVAA
TTGLSHLLKR YPRELSGGQR QRVAMSRAII RHPKAFLFDE PLSNLDAALR VHMRKEIRSL
HDRLHATFVY VTHDQVEAMT MADHVVVMRD GIIEQQGAPL DLYDRPANRF VAGFIGSPAM
NFIPAIAAED GKSLILDFGA VKQTLAISRA IEPGRKLIAG IRPEHIGVVE PGHGSFDVPI
AFVESTGSST FIVAETQPEL TIVETRRDRV KAGDMIGLSV DPGQVHLFDA STDHLI
|
|---|
| |