Gene Rleg_6157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6157 
Symbol 
ID8016170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp203822 
End bp204724 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID644827463 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978663 
Protein GI241258779 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000377109 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGAGGA TCCTGATGAG CGTCAGGGAC GGCCGCGGTT TCGATATCGT GCTGGTCGCT 
TTCCCGCTCG GCTTTCTGTT CCTGATGGCG GGGCTGCCGC TGATCTATAA TGTTGTGATG
AGCTTCCAGG AGGTCGACAT GTTCAGCCTC GGGACCTTCT CGCGTCCCTT CGTCGGCTTC
AAGAATTATA CCGACCTCTT CGCGCAGCCG GAAACGCTGC CGATCTTCTA CAACACCATC
ATCTTCGTCG TCGGCTCCAT CGCCGGCCAG TTCCTGATCG GTTTCGGCCT GGCGCTGTTC
TTCTGGGTCA ATTTTCCCGG CGCCTCATGG ATGCGCGGCC TGTTCCTCGT CTCCTGGGTG
ATGCCCGGCC TCGTTGTCGG CGCCATCTGG AACTGGATTC TCTCCGGCGA TTTCGGCGTG
CTGAATTTCA TTCTCAAGGA AAGCGGCATC ATCTCGGGCA ACATCTTCTG GCGCTCGGAC
CCGCACTATT CGCTTTATGC CGTCATCATC GCCAATGTCT GGCTCGGCAC CTCGTTCAAC
ATGATCCTGC TGTCCGTCGG CCTTGCCGGC ATTCCTGCCG ATCTCTACGA AGCCGCCGAA
CTCGACGGCG CCAATGTCTG GCAGCGCTTC TGGACGATCA CGCTGCCGAT GATGCGCTCG
ACCATCGGCG CCATCATCGC ACTCGGCCTG ATCTTCACCC TGCAGCAATT CGATCTTTTC
GCCGCGATCA CGTCGGGCGG GCCGAACAAT TCATCGAATG TCACGCAATA TTGGGCCTGG
GATCTCTCCT TCCGCCAATA CGACTTCGCC AAGGGCGCAA CGATCTCCGT CATCATGATC
GTCTTCGTCA TGTTCGCGTC CGTCGTCTAT GTCCGGTCCA CACGCCACGA GGTGCGCGGA
TGA
 
Protein sequence
MKRILMSVRD GRGFDIVLVA FPLGFLFLMA GLPLIYNVVM SFQEVDMFSL GTFSRPFVGF 
KNYTDLFAQP ETLPIFYNTI IFVVGSIAGQ FLIGFGLALF FWVNFPGASW MRGLFLVSWV
MPGLVVGAIW NWILSGDFGV LNFILKESGI ISGNIFWRSD PHYSLYAVII ANVWLGTSFN
MILLSVGLAG IPADLYEAAE LDGANVWQRF WTITLPMMRS TIGAIIALGL IFTLQQFDLF
AAITSGGPNN SSNVTQYWAW DLSFRQYDFA KGATISVIMI VFVMFASVVY VRSTRHEVRG