Gene Rleg_6155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6155 
Symbol 
ID8016168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp201450 
End bp202352 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID644827461 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002978661 
Protein GI241258777 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.905747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000288206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAACC CTGCAAAATC CATTCGTATC GGCACCATGG TCAGCGGCAA CAAGGGCGAT 
GCCGCCGCGC GCATCGGCGA GATCGCCGGC ATGGGCTTCG AAAGCTTCGA GCCCTTCTTC
TGGCAGACGA CGAAGGGCCA GGACCTGGCC GAGCTCGGCA AGCGTTGCCT CGATGCGATC
GGCGACCGCG ACATCACCAT CTCGACGCTC GGCATGTTCG GCAATCCGCT GGAAGAGACC
GCAATCGACC TCGAGACGCT GGAGGGCTGG AAACATTGTA TCGACAATGC CCATCACTTC
GGCGCCACCT GCGTTGCCGG CTTCACCGGC CGCATCCGCG GCAAGCCGCT GACAGACAGC
CTGCCTCGCT ACAAGCAGAT CTGGAGCGAG CTTGCCAAGC GGGCGGCCGA CAAGGGCGTC
AAGATTGCTT TCGAGAATTG CGCCATGGAC GGCAACTGGG CGACCGGCGA CTGGAATATC
GCGCATAATC CCGACGCCTG GGAACTGATG TTCAACGAGA CGCCTGACGA TAATATCGGG
CTGGAGTGGG AGCCGTGCCA TCAGATGGTC TATCTGATCG ACCCTTTGCC GCAGATCCGC
AAATGGGCGC ACAAGTTCTT CCACGTCCAC GGCAAGGACG CGACCATCCG CTGGGAGGTC
ATCAAGGAAC ACGGTATCTT CGGCAAGGAG AAATTCGTCT TCATGCGCAC GCCGGGCTTC
GGCGACAGCA ACTGGACCGA CATCATTTCT GAACTGCGCC TCGCCGGCTG GTCGGGCTCG
ATCGACATCG AAGGCTGGCA CGACCCGGTC TATCGCGACG CGCTTGAAAT GACCGGCCAG
GTCTATGCGC TGAACCACCT CAAGCATGCC CGGGGCGGCG AATTCGTCGT CGACCCCATC
TGA
 
Protein sequence
MSNPAKSIRI GTMVSGNKGD AAARIGEIAG MGFESFEPFF WQTTKGQDLA ELGKRCLDAI 
GDRDITISTL GMFGNPLEET AIDLETLEGW KHCIDNAHHF GATCVAGFTG RIRGKPLTDS
LPRYKQIWSE LAKRAADKGV KIAFENCAMD GNWATGDWNI AHNPDAWELM FNETPDDNIG
LEWEPCHQMV YLIDPLPQIR KWAHKFFHVH GKDATIRWEV IKEHGIFGKE KFVFMRTPGF
GDSNWTDIIS ELRLAGWSGS IDIEGWHDPV YRDALEMTGQ VYALNHLKHA RGGEFVVDPI