| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6149 |
|---|
| Symbol | |
|---|
| ID | 8016106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | + |
|---|
| Start bp | 195021 |
|---|
| End bp | 196229 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644827455 |
|---|
| Product | Acyl-CoA dehydrogenase type 2 domain protein |
|---|
| Protein accession | YP_002978655 |
|---|
| Protein GI | 241258771 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.176892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.003301 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CCAATGTCGT CTTCGCGACC AGCCGCAACC CGACGCGCGA AGACCTCTTT
GCCCGTGCGC AGGATATCTC TGCCGACCTT TCCGGGCGCG CCGCAGACCT CGATCGCGAA
GGCCGCCCGC CGCTTGGCGA AATCGTCAAA TTGAAGAATG CCGGCCTGCT CAATGCGCTG
CATCCCCGTG AGATCGGCGG CGGTGGCCTC GATTGGGTCG ACGGGCTGAG GCTGGTGCGC
ATTCTCGCGC GTGGCGAGAG CTCGATCGGC CAGCTGCTCG GCTACCACTA TGTCAACAGC
CAGTACATCT ATTGGGCCCT TGATACCGCA CGCGCCCATG CGCTGGGCAG CGATACGGTC
GCCAGGAACC TCTATTGGGG TGCGGCCGTC AATCCGCGCG ATCCCGGGCT GGTGCTCACC
CGTCGCGGCA ACGGCTATGT GCTGAACGGA CGCAAGTCCT TCTCCACGGC AGCGCGGGTC
TCCGATTACA TCAATGCCAA TGCGACGCTC GACGACAAGA TCGCCGGTTT CGCCGTGCCG
ACCAATCGTC AAGGTTACGT CGCCAATGAC GACTGGGACA ATATCGGTCA GCGCCTGTCA
GACAGCGGTA GCGTCGAATT TCATGATTTC CCCGTTTACG AGGAGGATTT CGTCGGCGTA
CCCGCCGCAC CCGACGCAGC ACCGCCGGTG CTGTCGACCT TCAATACGCC GTTCATCCAG
CTGGTCTTCG TTAATTTCTA TCTCGGCACC GCGGAAGGCG CGCTGCACGC GGCCGTCGAT
TACGTCCGCA ACACGACCCG GCCGTGGATA ACCTCCGGTG TCGAGCGGGC GGCGGATGAT
CCTTATATCC TCGAACGCGT CGGCGAATTC ACTGCCGCGC TGAAGGCCTC GGCGGCCCTT
GCCGACAGTG CCGCAGCCGC CGTGCAGGCG GGTCTTGCCC GCGGCCGCGA CGTCACCGAG
CGCGAGCGCG GCGCCGCGGC GGCGGAAGCC TATGGCGCCA AAGTCCACGC CACTCATGTC
TCGCTTGACA TCACGTCGCG CGTCTTCGAG CTGACGGGCG CACGCTCAAC AGCCGACAAA
TACCGCTTCG ACCGTTTCTG GCGCAATGTC CGCACCCATA CTCTGCACGA CCCGGTCTTC
TACAAGGCGA GGGAAGTCGG CGAATTCGTG CTGAACGACA AGATACCGCA GGTCAGCCTC
TACAGCTGA
|
|---|
| Protein sequence | MSQSNVVFAT SRNPTREDLF ARAQDISADL SGRAADLDRE GRPPLGEIVK LKNAGLLNAL
HPREIGGGGL DWVDGLRLVR ILARGESSIG QLLGYHYVNS QYIYWALDTA RAHALGSDTV
ARNLYWGAAV NPRDPGLVLT RRGNGYVLNG RKSFSTAARV SDYINANATL DDKIAGFAVP
TNRQGYVAND DWDNIGQRLS DSGSVEFHDF PVYEEDFVGV PAAPDAAPPV LSTFNTPFIQ
LVFVNFYLGT AEGALHAAVD YVRNTTRPWI TSGVERAADD PYILERVGEF TAALKASAAL
ADSAAAAVQA GLARGRDVTE RERGAAAAEA YGAKVHATHV SLDITSRVFE LTGARSTADK
YRFDRFWRNV RTHTLHDPVF YKAREVGEFV LNDKIPQVSL YS
|
|---|
| |