Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6140 |
Symbol | |
ID | 8016097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 184568 |
End bp | 185347 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644827446 |
Product | ABC transporter related |
Protein accession | YP_002978646 |
Protein GI | 241258762 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.620446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00957092 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGATG TGCTGCTTTC CGTCGAAAAC CTGTCGAAAG GGTTTGCTTC TGCGGGCCGC CAGGTTGCCG CTCTCGACAA TGTGTCGCTG ACGATCGCGC CTGGGGAAAC GCTCGGCCTC GTCGGCGCCT CCGGCAGCGG AAAATCGACG CTGTCGCGCA TCCTGCTGCG GCTTGTTGCT GCCGATGCCG GCTCGATTCG CTTCGAGGGA GAGGATTGGC TCGCGCTGAA TGGCGCGCCT TTACGCCGCC GGCGGGCGCG TATGCAGATG GTGTTTCAGG ATCCGCTCGC CGCCTTCAAT CCGTTGGCGA GCGTTAGTGC AGTGCTCGAC GATCCGCTTC GCATCCACGG CGTCGCAAAA GACCGGCGCC CCGGCGAGAT CGTCGATCTG CTAGAGCGTG TCGGCCTCAC CGCCGATCAT GCCGCCCGGC CGGTGCGTTC GCTCTCCGGC GGCCAGCGCC AGCGCGTGGC GATTGCGCGG GCGATTGCGA CGCGGCCGTC GATGCTGGTG CTCGACGAGG CGGTCTCGGC GCTCGACGTC ACCGTGCGTG GCAGGATCCT GGAGCTTCTG GTCGATCTGC AGAAAGAACA GGGCATTGCC TGTCTGTTCA TTTCGCACGA TCTGGCCGTG GTGCGCGCCG TTTCCCACCG CATCGCCGTT ATCGATGGCG GACGGATCGT CGAGACCGGT CCGGCAGCGG CGGTCGTTGC CGCTCCGCAA TCGGAGGCCG CCCGCGCGCT CGTGGGCGCC GTCCCCCGTC TCGTGACCGA TCTTTGCTGA
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Protein sequence | MNDVLLSVEN LSKGFASAGR QVAALDNVSL TIAPGETLGL VGASGSGKST LSRILLRLVA ADAGSIRFEG EDWLALNGAP LRRRRARMQM VFQDPLAAFN PLASVSAVLD DPLRIHGVAK DRRPGEIVDL LERVGLTADH AARPVRSLSG GQRQRVAIAR AIATRPSMLV LDEAVSALDV TVRGRILELL VDLQKEQGIA CLFISHDLAV VRAVSHRIAV IDGGRIVETG PAAAVVAAPQ SEAARALVGA VPRLVTDLC
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