Gene Rleg_6110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6110 
Symbol 
ID8016067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp149115 
End bp150188 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID644827416 
ProductABC transporter periplasmic binding protein, urea carboxylase region 
Protein accessionYP_002978616 
Protein GI241258732 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.876709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTT TTTCGAAGAT TCTATCGATT ACCGCACTGA CGGCGTCCCT GGCGCTGGGA 
CTGGGCTCCA TCGCCAAGGC CGAACAGAAG ACCGACTTCA AGGTCGCATG GTCGATCTAT
GTCGGCTGGA TGCCCTGGGG TTATGCTGCT GATCACGGCA TCGTCAAGAA GTGGGCCGAC
AAATACGGCA TCAAGATCGA GGTCACCCAG TTCAACGACT ACGTCGAATC GATGAACCAG
TATACCGCAG GCGCCTTCGA CGCCGTGACG CTGACCAACA TGGACGGCCT GTCGATCCCG
GCCGCCGGCG GCGTCGATAC GACAGCCGTA ATTGTCGGCG ACTTCTCGAA CGGCAATGAT
GCCGTCATCC TCAAGGACAA GGCGGGCCTT GCCGACATCA AGGGACAAAA CGTCAATCTC
GTCGAATTTT CCGTCTCGCA CTACCTGCTC GCCCGCGCGC TCGAGAGCAT CAAGCTGACC
GAGCGCGATG TGAAAGTCGT CAACACCTCC GACGCCGATA TGGTCGCCGC TTACAAGACG
GCTGACGTGA CCGCGGTCGT CACCTGGAAC CCGCTGGTCT CGACCATTCT CGAGGATCCC
ACGGCCAAGA AGGTCTTCGA CAGCTCGCAG GTGCCGGGCG AGATCATCGA CCTGATGGTC
GCCAATTCAG GCGTGCTGAA GGACAATCCG AATTTCGGCA AGGCGCTCGC CGGCATCTGG
TATGAAACCG CAGCACTTCT GACTGCTGAC AGTGCCGACG GCAAGGCTGC GCGCGAGGCG
ATGGGCCAGG CATCGGGCAC CGATCTCAAG GGCTTCGAAT CCCAGCTTGC TGCCACCAAG
CTGTTTGCCA AGCCGGCCGA TGCCGTTGCC TTCACTTCGT CGGGCAGCCT GCCGAAGACA
ATGGATCTCG TCCGCAACTT CCTGTTCGAA AAAGGCTTGC TCGGCAATGG CGCGCCATCG
GCCGACGTCA TCGGCATCGA AATGCCTGAC GGCAAGGTCC TCGGCGACAG CGGCAACGTC
AAGCTGCGCT TCACCGAGAC CTACATGAAG GCCGCCGCCG ACGGTTCGCT CTGA
 
Protein sequence
MQTFSKILSI TALTASLALG LGSIAKAEQK TDFKVAWSIY VGWMPWGYAA DHGIVKKWAD 
KYGIKIEVTQ FNDYVESMNQ YTAGAFDAVT LTNMDGLSIP AAGGVDTTAV IVGDFSNGND
AVILKDKAGL ADIKGQNVNL VEFSVSHYLL ARALESIKLT ERDVKVVNTS DADMVAAYKT
ADVTAVVTWN PLVSTILEDP TAKKVFDSSQ VPGEIIDLMV ANSGVLKDNP NFGKALAGIW
YETAALLTAD SADGKAAREA MGQASGTDLK GFESQLAATK LFAKPADAVA FTSSGSLPKT
MDLVRNFLFE KGLLGNGAPS ADVIGIEMPD GKVLGDSGNV KLRFTETYMK AAADGSL