Gene Rleg_6090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6090 
Symbol 
ID8016047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp125055 
End bp126482 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content60% 
IMG OID644827396 
Productputative L-arabinose isomerase protein 
Protein accessionYP_002978596 
Protein GI241258712 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2160] L-arabinose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC GCCCCTTGAA GGCCGGCCTT TTCGGTATCG GTCTGGAGGC CTATTGGTCG 
CAATTCAACG GTCTGGAAGC GCGGTTGCGC GGCTATGTCG ATACCGTCGA GGCAAAGCTT
GCGCGCCCAG GCGTCGAGGT CGTCAACCTC GGGCTGATCG ACACGCCCGA AAAGGCGATC
GAGGCCGGTC ACCAGTTTCG CCAGGCCGAT GTCGATATCA TCTTTCTCTA CATCACCACC
TATGCGTTGT CGTCGACGGT TCTTCCAGTG GTCCGTCGCG CCAAGGTTCC GGTGATCATC
CTCAATCTGC AGCCGACCGC AGCCATCGAC TATGCCACTT TCAACGCCCT CGGCGATCGG
ACAGCGATGA CCGGCGACTG GCTGGCGCAT TGCTCTGCCT GCCCCGTCCC CGAAATCGCC
AATGTCTTCC GTCGAGCGGG CATCAGCTTT CACCAGGTGA CCGGCGTTCT CACCGGCGAT
CCCGTCGTCG AAAACGAGAT CGACGGCTGG ATCGAGGCCG CCCGCGTCGC ACATGTGATG
GCGCATAACC GGCTCGGCGT CATGGGCCGC TACTACAACG GCATGCTGGA TATCTATTCA
GATCTCACCG CGCAGGCAGC GGCCTTCGGC ACCCATATCG AGGTGCTGGA AATCGACGAA
CTGGCGCAGT TGCGGCGTGA TTTGAGCGAG GAAGACGTCT CCACCTGCTT GGCGACGATC
ATCGCCGAAT TCGATGTCCA GCCGGATTGC GACCCCAAAG AACTGGCACG TGCGGCAAAG
ACCGCCGTGG CGCTTCGCAA GCTGGTCGAT AAGAAATCGC TCGGCTCACT TGCCTATTAC
TACGAATCCC AGCCCGGCCA CGAATATGAG GATATCATCA CCTCGGTCAT CGTCGGCTGT
TCGATGTTAA CGGCCAGCGG CGTGCCGGTT TCCGGCGAAT ATGAGATCAA GAACGCCCAG
GCGATGAAAA TCATGGACAG CTTCGGTGCG GGCGGCTCAT TCACCGAGTA TTATGCCATG
GATTTCGCCG CAGATGTCGT GCTGATGGGG CATGACGGGC CGGGGCATAC GAAAATTGCC
CAGGGGCGTA CGAAGATCCG GCCCCTCAAC GTTTTTCACG GCAAGGTCGG CTCTGGCGTC
AGCGTTGAAA TGTCGGTTCA GCACGGGCCG GTGACGCTGC TCTCTATCGT CGAAGACGCC
GGCAACATCA GGCTGCTTTG CGCCGAAGGC GCCTCTGTGG CGGGCCCGAT CCTCGAAATC
GGCAACACCA ACAGCCGTTA TCGATTTCCA CTTGGAGCCC GGCGCTTTGT TGAGACGTGG
AACGCGCAGG GACCTGCCCA CCATTGCGCA GTTGGCGTCG GACACATTGC CGGGCGCATC
GAGAAGCTTG GAAAACTCCT GGATCTGGAC GTCGTAAAAG TCTGCTGA
 
Protein sequence
MSERPLKAGL FGIGLEAYWS QFNGLEARLR GYVDTVEAKL ARPGVEVVNL GLIDTPEKAI 
EAGHQFRQAD VDIIFLYITT YALSSTVLPV VRRAKVPVII LNLQPTAAID YATFNALGDR
TAMTGDWLAH CSACPVPEIA NVFRRAGISF HQVTGVLTGD PVVENEIDGW IEAARVAHVM
AHNRLGVMGR YYNGMLDIYS DLTAQAAAFG THIEVLEIDE LAQLRRDLSE EDVSTCLATI
IAEFDVQPDC DPKELARAAK TAVALRKLVD KKSLGSLAYY YESQPGHEYE DIITSVIVGC
SMLTASGVPV SGEYEIKNAQ AMKIMDSFGA GGSFTEYYAM DFAADVVLMG HDGPGHTKIA
QGRTKIRPLN VFHGKVGSGV SVEMSVQHGP VTLLSIVEDA GNIRLLCAEG ASVAGPILEI
GNTNSRYRFP LGARRFVETW NAQGPAHHCA VGVGHIAGRI EKLGKLLDLD VVKVC