Gene Rleg_6035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6035 
Symbol 
ID8016297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp64089 
End bp65003 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID644827343 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978543 
Protein GI241258659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.968409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.596602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG ATCGTCTGAT ATCAGCGTCA GAGCGCGGAC CTTCGGGTCC GCGCAGCCGG 
CGCCCACTCC CGCCATGGGT TTCGACGACG GCGCTGCTGC TGCCGACCTA TGGGTGGCTG
ACACTTGCCG TCTTTCTGCC GCTGCTGACC ATGTTCGTGT TCAGCTTCAT GTCGGCGACA
CCGATGGGCA AGGCCCCGAT CGTCTTTACG CTGAAGCAGT ACCGCGCGTT CATCGATCAA
CCCTATCTGG TCGGGATCGG TATCACGTCG CTGCTGATCG GCTTCTGGAC GACGCTGTTC
TGCGCGGTGC TTGGTTTCCT GGCGGCCGTG GCACTGGTCC GCTCGACCTT CGGCAAGACG
CGAGAGATGT TGTTGATCCT CATTCTCCTG CCATTCTGGA CCAACGGTCT TGTGCGCGTC
TTTTCGTGGA CCATGGTGCT GCGCGAAAAC GGCTTTCTCG ACAGTCTGCT GCACATGATT
GCTCCGGACG CGGGTTCCAT CGGCTTTCTC TACACGCGCT ATGCCGTGGT GGTTGGTCTT
GTTCACGGCT ACCTGCCGTA CATGATCCTG ACCTGCTACA TAGCTCTGGT GGCCATCGAC
GACGCGATCA TTGAGGCTGC TTCAAGCCTC GGCGCGCGCT GGTGGACCAT CCTGTTCAAG
ATTTTGATGC CGCTTTCGGC TCCCGGACTG ATCTCCGGCG CCGTTTTGAT CTTCATTCCG
GTCATCGGTT CATTCATGGA ACCGCGCATT CTGGGCGGTC GTGTCGGCGT GACCATGGGA
ACGGTGATCG AGGATCAGTT CACCCAGGCC TTCAACTGGC CTTTGGGCGC ATCGTTGTCC
TTTACGCTGC TGGCTGTCGT GCTCGCAATT TTCGCAACCT TTTCCGGTGT CCTGCGCCGC
GGAACGGTCG CTTGA
 
Protein sequence
MQNDRLISAS ERGPSGPRSR RPLPPWVSTT ALLLPTYGWL TLAVFLPLLT MFVFSFMSAT 
PMGKAPIVFT LKQYRAFIDQ PYLVGIGITS LLIGFWTTLF CAVLGFLAAV ALVRSTFGKT
REMLLILILL PFWTNGLVRV FSWTMVLREN GFLDSLLHMI APDAGSIGFL YTRYAVVVGL
VHGYLPYMIL TCYIALVAID DAIIEAASSL GARWWTILFK ILMPLSAPGL ISGAVLIFIP
VIGSFMEPRI LGGRVGVTMG TVIEDQFTQA FNWPLGASLS FTLLAVVLAI FATFSGVLRR
GTVA