Gene Rleg_6033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6033 
Symbol 
ID8016295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp62263 
End bp63312 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content63% 
IMG OID644827341 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_002978541 
Protein GI241258657 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAACG TTAAAGTCAA TTCCGTCGCC AAGACCTACG GCAGCACGCC GGTCCTGTCC 
GATATCACCA CCGAATTCCC TGAAGGCTCT TTCACCAGCC TTCTCGGCCC ATCCGGCTCC
GGCAAGACCA CGCTGCTGCG CATCATCGCG GGCTTTATCA AGCCCGACCA GGGCGTCGTC
ACGATCGGCA ACAATGATGT CACCGACATT CCGGTCTGGG GCCGTAACAT CGGCATGATG
TTCCAGTCCT ACGCGCTGTT CCCGCATATG ACGATTGCCC AGAACGTCGC CTTCGGTCTC
GAACGCCGGG GCATCAAGGG CGCCGCCGCC CGCAAGGAAG TCGACCGCGC GCTGGAAATG
GTGCATCTGC CTGGCTTTGC CGATCGCATG CCCAAGCAGT TGTCCGGGGG CCAGCAACAG
CGCGTTGCGC TGGCCCGCGC CATGGTCATC AAGCCGAGCG TACTGCTCCT CGACGAGCCG
CTGTCGGCGC TCGATCGGCG CCTGCGCCAG GAAATGCAGG TCGAACTGCT GCGCATCCAG
CGCGAAAGCG GCCTGACGAC GATCTTCGTC ACCCACGACC AGGAAGAGGC GCTGACGCTG
TCCGATAAGG TAGCGATCCT CGACAAGGGC CGCATCGTCC AGATCGGCGA GCCGGAAACC
GTCTATGAGA GGCCGCTGAC GCGCTTTGCC GCCGAATTCC TCGGCGATTC CAACTTCCTC
ACCGGGACGG TGGACAACGG CGCCGTGCGT CTCGCCGATG GGACGGTAGT TCAGACCACC
GGCACGTTGC CATCAAGCGG CTCGAACGTC ACGCTCGCGG TGCGCCCGGA GAAGATGTCG
ATCGCATCGG GTCCGACGGA TGGCAACAGC CTGACGGCGC GCATCACCAC CGTCATCTAC
GCAGGTCCCG TGCTGTCCTA TCTGCTGGAG ACGGCAGACG GTCTGCCGCT GAAGCTGTTT
GCACAGAACC GCGATGGCAA GGTCCTGAGC GATGGCGACA CCATCACCCT GACCTGGGCC
GCTGAACACA CCGTCCCGGT GGCCGACTGA
 
Protein sequence
MTNVKVNSVA KTYGSTPVLS DITTEFPEGS FTSLLGPSGS GKTTLLRIIA GFIKPDQGVV 
TIGNNDVTDI PVWGRNIGMM FQSYALFPHM TIAQNVAFGL ERRGIKGAAA RKEVDRALEM
VHLPGFADRM PKQLSGGQQQ RVALARAMVI KPSVLLLDEP LSALDRRLRQ EMQVELLRIQ
RESGLTTIFV THDQEEALTL SDKVAILDKG RIVQIGEPET VYERPLTRFA AEFLGDSNFL
TGTVDNGAVR LADGTVVQTT GTLPSSGSNV TLAVRPEKMS IASGPTDGNS LTARITTVIY
AGPVLSYLLE TADGLPLKLF AQNRDGKVLS DGDTITLTWA AEHTVPVAD