Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6030 |
Symbol | |
ID | 8016292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 58837 |
End bp | 61179 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644827338 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_002978538 |
Protein GI | 241258654 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGC CGAGCGACGC CGACATTCGA GCGCTTGTCG ATCAGATGAC GGTGGCCGAA AAAGTCGAAC TCCTGAGCGG GCGTGGGCTG TGGAAGACGG CATCGATCAG CAGGCTCGAT GTTCCTTCGA TCGTCATGAC CGATGGGGCC TATGGGGTGC GCTACTCGAC CACCCAGATC GACGCCGGCG ACAACGACGA AGACAGTCTG CGGGCGTTCC TCGATCTCGT CGGGCAACAG GGCGACGGAT CGGGCGGCAT GTTCGGTGCC ACCCGTCCAG CCACGTGCTT TCCCAACGGC AATCTGCTCG GCTGTTCCTG GGATATTGAT CTTGCCTATC GCATGGGCGC TGCGCTGGCG GCCGAGTGCC AGGATTTCGG GGTTCATCTG GTTTTGGGCC CCGGCATCAA CATAAGGCGC ACGCCGCTGG CCGGGCGGGC CTACGAATAT TATTCCGAGG ATCCTGTTAT CAGCGGCGAC ATGGCGGCGG CCGTCATCTG CGGATTGCAG GATAACGGCG TCGGCGCCTC GCTCAAGCAT TTCGCCTGCA ATAATTCCGA AATCGAGCGA ACCACGACCA GTTCCGATGT CGATGAACGC GCCCTGCGCG AAATATACTT GGCAGGCTTC GAGCGGGCCA TCGAAAAGAG CGCGCCGTGG AGCGTGATGA GCGCTTATAA TCCGCTGAAC GGCATCCAGG CCGCCGAACA TCATTGGCTG TTGCGAACCG TGCTGCGCGG TGAATGGGGC TATGACGGGC TTGTCCTGTC AGACTGGCAC GCGATCAAGG ATCGTGGCGC TGCACTCGAT GCCGGCACCG AACTCGACAT GCCGGAAAGC AAGCCCCGCA AAGCGCGTCT CCATGCGGCG ATCAACGCCG GCGACGTGGC GCCCGAGGTG ATTGATGCGG CTTGCGCCAA TGTTCTGGCG TTCGTGCGCA AATGCAAGTC GAGCGAGCGG CGCGGCACGC CGGCGGATTT CGAGGCGCAT CATGTGCTGG CGCGCGACAT CGCGGCGGAA TCGATCGTGC TGCTGCGCAA TGAGGGCCAG GCGCTGCCGC TCGATCCCGG CGGGCCGGGT GAGCTTCTCA TTGTCGGCGA CGGCGCCGTC ACTCCTGTTA TCCAAGGCTC CGGCTCGGCC ACCACCAATC CCTATCGCGT CGACAGTCCG TTCGTTCAGA TTGCCGCGCG GGCAGGAGAC AGCCTGAAGG TCCGGCATCT GCCCTTCTCG CCGGTCGCGC AGCCCGACGT GACTGCGTCG ATCGAGGCGA TCGTCGAAGC CGCGGAGCGT GCCGATGTAG TTGTCATGTT TGCGGAAAAC GAGAAGAGCC GTCACGGCGA GGGCAACGAC CGCGACACAC TGAAGCTCGC CGCCAGCCAC GATGAACTCA TCACGGCGTT GTCGGCGACA GGTCGCAAGC TCGTCGTCGT GCTCTCGATG CCAGACACGG TCGAGATGCC GTGGATCGGG GATGTCGACG CCGTCCTGGC CAGTTTCTAT GCCGGGCAGG GCGGTGGCGA AGCACTGGCC CGCATCCTGT TTGGCGAGCA GAACCCGTGC GGCAAGCTCT CCGCCAGCAT GCCGGTTCGC ATGCAGGATA TTCCGGGCTG GCACACCTAT CCGGGCGAGC ATGGCCGGCA TGTCTATAGC GAGGGCATTT TCGTCGGTTA CCGGTTCTAC GATCTGAAGG CGATGACGCC AGTCTTTCCG TTCGGACATG GGCTCAGCTA CACCACGTTC GCCTATGAGG ATCTCAGGCT CGATACGCAC GAGATCACGC CCGGCGCCGG CTGCACCGCC GCCCTTACCA TTCGCAACAC AGGTACGGTT GCCGGCAAGG AAATCGTGCA ACTCTATGTC CGGCCGATTA AGCCGGGTCT CAAACGACCC GTCCGTGAGC TCAAGTCTTT CACCAAGCTT CATCTGGCGC CAGGAGAAGC GAAGAGGGTA ACGCTTGGCC TGGCGCAGCG CGATTTCCAG TATTTCGACA CGTCGCGTTC GGCTTGGGTT CTCGATGCCG AGGCTTTTGT AATCGAAGCG GCTGCATCCT CCAGAGACAT CCGCTTGTCG ATCACCTTGC CATGCAGGTC AGAGGCTCCG GCGCTGCCGA CGATTTCGGC CAATTCTCCG ACAGCGCTTG TCTTTGCCCA CCCGAACGCC GAGGCCGCTC TCGTTGGTTT CTTCGTCAGC AGGCTTTCGA TCTCCGCTGC CGAAGCCATG GCCCTTCTTG CCAAGACAAA GGGCTCCTTT CTCGGCTTCT ACGACACTTT GAGCTGGTAT GTAGGAGACA GCGTCAAAGA GGCGGATATT GCCGAAGTCT TTTCAGAACT AAACCAACAC TAG
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Protein sequence | MFQPSDADIR ALVDQMTVAE KVELLSGRGL WKTASISRLD VPSIVMTDGA YGVRYSTTQI DAGDNDEDSL RAFLDLVGQQ GDGSGGMFGA TRPATCFPNG NLLGCSWDID LAYRMGAALA AECQDFGVHL VLGPGINIRR TPLAGRAYEY YSEDPVISGD MAAAVICGLQ DNGVGASLKH FACNNSEIER TTTSSDVDER ALREIYLAGF ERAIEKSAPW SVMSAYNPLN GIQAAEHHWL LRTVLRGEWG YDGLVLSDWH AIKDRGAALD AGTELDMPES KPRKARLHAA INAGDVAPEV IDAACANVLA FVRKCKSSER RGTPADFEAH HVLARDIAAE SIVLLRNEGQ ALPLDPGGPG ELLIVGDGAV TPVIQGSGSA TTNPYRVDSP FVQIAARAGD SLKVRHLPFS PVAQPDVTAS IEAIVEAAER ADVVVMFAEN EKSRHGEGND RDTLKLAASH DELITALSAT GRKLVVVLSM PDTVEMPWIG DVDAVLASFY AGQGGGEALA RILFGEQNPC GKLSASMPVR MQDIPGWHTY PGEHGRHVYS EGIFVGYRFY DLKAMTPVFP FGHGLSYTTF AYEDLRLDTH EITPGAGCTA ALTIRNTGTV AGKEIVQLYV RPIKPGLKRP VRELKSFTKL HLAPGEAKRV TLGLAQRDFQ YFDTSRSAWV LDAEAFVIEA AASSRDIRLS ITLPCRSEAP ALPTISANSP TALVFAHPNA EAALVGFFVS RLSISAAEAM ALLAKTKGSF LGFYDTLSWY VGDSVKEADI AEVFSELNQH
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