Gene Rleg_6030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6030 
Symbol 
ID8016292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp58837 
End bp61179 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content62% 
IMG OID644827338 
Productglycoside hydrolase family 3 domain protein 
Protein accessionYP_002978538 
Protein GI241258654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC CGAGCGACGC CGACATTCGA GCGCTTGTCG ATCAGATGAC GGTGGCCGAA 
AAAGTCGAAC TCCTGAGCGG GCGTGGGCTG TGGAAGACGG CATCGATCAG CAGGCTCGAT
GTTCCTTCGA TCGTCATGAC CGATGGGGCC TATGGGGTGC GCTACTCGAC CACCCAGATC
GACGCCGGCG ACAACGACGA AGACAGTCTG CGGGCGTTCC TCGATCTCGT CGGGCAACAG
GGCGACGGAT CGGGCGGCAT GTTCGGTGCC ACCCGTCCAG CCACGTGCTT TCCCAACGGC
AATCTGCTCG GCTGTTCCTG GGATATTGAT CTTGCCTATC GCATGGGCGC TGCGCTGGCG
GCCGAGTGCC AGGATTTCGG GGTTCATCTG GTTTTGGGCC CCGGCATCAA CATAAGGCGC
ACGCCGCTGG CCGGGCGGGC CTACGAATAT TATTCCGAGG ATCCTGTTAT CAGCGGCGAC
ATGGCGGCGG CCGTCATCTG CGGATTGCAG GATAACGGCG TCGGCGCCTC GCTCAAGCAT
TTCGCCTGCA ATAATTCCGA AATCGAGCGA ACCACGACCA GTTCCGATGT CGATGAACGC
GCCCTGCGCG AAATATACTT GGCAGGCTTC GAGCGGGCCA TCGAAAAGAG CGCGCCGTGG
AGCGTGATGA GCGCTTATAA TCCGCTGAAC GGCATCCAGG CCGCCGAACA TCATTGGCTG
TTGCGAACCG TGCTGCGCGG TGAATGGGGC TATGACGGGC TTGTCCTGTC AGACTGGCAC
GCGATCAAGG ATCGTGGCGC TGCACTCGAT GCCGGCACCG AACTCGACAT GCCGGAAAGC
AAGCCCCGCA AAGCGCGTCT CCATGCGGCG ATCAACGCCG GCGACGTGGC GCCCGAGGTG
ATTGATGCGG CTTGCGCCAA TGTTCTGGCG TTCGTGCGCA AATGCAAGTC GAGCGAGCGG
CGCGGCACGC CGGCGGATTT CGAGGCGCAT CATGTGCTGG CGCGCGACAT CGCGGCGGAA
TCGATCGTGC TGCTGCGCAA TGAGGGCCAG GCGCTGCCGC TCGATCCCGG CGGGCCGGGT
GAGCTTCTCA TTGTCGGCGA CGGCGCCGTC ACTCCTGTTA TCCAAGGCTC CGGCTCGGCC
ACCACCAATC CCTATCGCGT CGACAGTCCG TTCGTTCAGA TTGCCGCGCG GGCAGGAGAC
AGCCTGAAGG TCCGGCATCT GCCCTTCTCG CCGGTCGCGC AGCCCGACGT GACTGCGTCG
ATCGAGGCGA TCGTCGAAGC CGCGGAGCGT GCCGATGTAG TTGTCATGTT TGCGGAAAAC
GAGAAGAGCC GTCACGGCGA GGGCAACGAC CGCGACACAC TGAAGCTCGC CGCCAGCCAC
GATGAACTCA TCACGGCGTT GTCGGCGACA GGTCGCAAGC TCGTCGTCGT GCTCTCGATG
CCAGACACGG TCGAGATGCC GTGGATCGGG GATGTCGACG CCGTCCTGGC CAGTTTCTAT
GCCGGGCAGG GCGGTGGCGA AGCACTGGCC CGCATCCTGT TTGGCGAGCA GAACCCGTGC
GGCAAGCTCT CCGCCAGCAT GCCGGTTCGC ATGCAGGATA TTCCGGGCTG GCACACCTAT
CCGGGCGAGC ATGGCCGGCA TGTCTATAGC GAGGGCATTT TCGTCGGTTA CCGGTTCTAC
GATCTGAAGG CGATGACGCC AGTCTTTCCG TTCGGACATG GGCTCAGCTA CACCACGTTC
GCCTATGAGG ATCTCAGGCT CGATACGCAC GAGATCACGC CCGGCGCCGG CTGCACCGCC
GCCCTTACCA TTCGCAACAC AGGTACGGTT GCCGGCAAGG AAATCGTGCA ACTCTATGTC
CGGCCGATTA AGCCGGGTCT CAAACGACCC GTCCGTGAGC TCAAGTCTTT CACCAAGCTT
CATCTGGCGC CAGGAGAAGC GAAGAGGGTA ACGCTTGGCC TGGCGCAGCG CGATTTCCAG
TATTTCGACA CGTCGCGTTC GGCTTGGGTT CTCGATGCCG AGGCTTTTGT AATCGAAGCG
GCTGCATCCT CCAGAGACAT CCGCTTGTCG ATCACCTTGC CATGCAGGTC AGAGGCTCCG
GCGCTGCCGA CGATTTCGGC CAATTCTCCG ACAGCGCTTG TCTTTGCCCA CCCGAACGCC
GAGGCCGCTC TCGTTGGTTT CTTCGTCAGC AGGCTTTCGA TCTCCGCTGC CGAAGCCATG
GCCCTTCTTG CCAAGACAAA GGGCTCCTTT CTCGGCTTCT ACGACACTTT GAGCTGGTAT
GTAGGAGACA GCGTCAAAGA GGCGGATATT GCCGAAGTCT TTTCAGAACT AAACCAACAC
TAG
 
Protein sequence
MFQPSDADIR ALVDQMTVAE KVELLSGRGL WKTASISRLD VPSIVMTDGA YGVRYSTTQI 
DAGDNDEDSL RAFLDLVGQQ GDGSGGMFGA TRPATCFPNG NLLGCSWDID LAYRMGAALA
AECQDFGVHL VLGPGINIRR TPLAGRAYEY YSEDPVISGD MAAAVICGLQ DNGVGASLKH
FACNNSEIER TTTSSDVDER ALREIYLAGF ERAIEKSAPW SVMSAYNPLN GIQAAEHHWL
LRTVLRGEWG YDGLVLSDWH AIKDRGAALD AGTELDMPES KPRKARLHAA INAGDVAPEV
IDAACANVLA FVRKCKSSER RGTPADFEAH HVLARDIAAE SIVLLRNEGQ ALPLDPGGPG
ELLIVGDGAV TPVIQGSGSA TTNPYRVDSP FVQIAARAGD SLKVRHLPFS PVAQPDVTAS
IEAIVEAAER ADVVVMFAEN EKSRHGEGND RDTLKLAASH DELITALSAT GRKLVVVLSM
PDTVEMPWIG DVDAVLASFY AGQGGGEALA RILFGEQNPC GKLSASMPVR MQDIPGWHTY
PGEHGRHVYS EGIFVGYRFY DLKAMTPVFP FGHGLSYTTF AYEDLRLDTH EITPGAGCTA
ALTIRNTGTV AGKEIVQLYV RPIKPGLKRP VRELKSFTKL HLAPGEAKRV TLGLAQRDFQ
YFDTSRSAWV LDAEAFVIEA AASSRDIRLS ITLPCRSEAP ALPTISANSP TALVFAHPNA
EAALVGFFVS RLSISAAEAM ALLAKTKGSF LGFYDTLSWY VGDSVKEADI AEVFSELNQH