Gene Rleg_6012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6012 
Symbol 
ID8016277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp39390 
End bp41975 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content61% 
IMG OID644827323 
ProductABC transporter related 
Protein accessionYP_002978523 
Protein GI241258639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATG TTTCAGGCAG ACCAAAAGCT GCTGGGACGA GCGCGACCGG CCAAGTCGTC 
GCGTCGCTCG AGGGCGTCAC GAAGTTCTTT GGTGGCACCG TCGCTGTCGC AAATGTGTCG
ATTGAACTGC GGGCAGGAGA GGTGCTTGCC CTGCTTGGAG AGAACGGTGC AGGCAAAAGC
ACCTGCGTCA AGCTTCTCGC CGGCGTCCAT CGGCCAGATG GCGGCCAAGT CGTCATGCTG
GGCAAGCCCG TTGCGTTCGC GTCTCCACTG GAGGCGCAGC GTGCCGGTGT CGCCGTCATG
CATCAGCATC CAGGTCTTTT TCCCGATCTC AGCATCGCCG AAAATCTCTT CATCGGGCAG
ACCGGTTTAC GCTGGAAACT TGACCACAGG CAGATGCAAA GCGAGGCTGC GCGCCTTCTG
ACGCTCGTCG GCCTCGACGT GGATGTCACA GCCCCTTTGG GGCGGCTGCG GACATCCGAG
CAGCAGCTCG TCGAAATTGC CCGTGCGCTT TCGCTCGACG CACGCGTTTT GATCATGGAC
GAACCAACCG CAGCCTTGTC GCAGAGAGAG GTGGAACGGT TGTTTACGGT CGTGGACAAT
CTCCGCCCGC AAGGGGTGGC GATGATGTTC GTTGGCCATC GCATGGACGA GATCTATCGC
GTCGCCGATC GTATCGCCGT TCTGCGTGAT GGTCGCCATG TCGGAACAGA GATTGCGGCG
GATCTATCCA GAGAACGTGC AGTCCAGATG ATGGTCGGGC GTTCCCTGGA TGGGCTCTAT
CCTCGCAACA ACACGGCGCC TGGCGATGTG GTTCTTGACG TCAGGGGACT GTCCTGTGAC
GGTTCGTTCC AGGATGTGTC GTTTCAATTG AGAGCTGGCG AAATCCTGGG GTTCGGCGGA
TTGGTCGGCA GTGGCCGGAC CGAGATCGCC CGGGTCCTGT TTGGCATCGA TCAGCCGACA
GGTGGAACGA TTGCAATCGA TGGCAAAACA ATGCGCTTTG CCTCGCCGAA AGATGCCATG
GGCAACGGCA TAGCCTATGT TTCCGAAGAC CGGATCGGGC AGAGCCTGGT TATGGACTTC
CCTATTCTGA ACAACGCGTC GTTGACTGTG CTCGACAAGG CGACCCGAGG CGGGTTGATG
TCGCGCGAAA AGGAAATTGG CATTGCAAAG CCGTTTCTTG ACCGTCTTCG GCTGCGCTTC
AAGTCCTTCG ATCAGCCGGT CGGCGCGCTG TCCGGCGGCA ACCAGCAAAA AGTCGTTCTG
GCAAAATGGC TAGCGACCAA TCCTCGCATC CTCATCCTCG ACGAGCCGAC GCAAGGCATC
GACGTTCAGA CCAAGGCCGA TGTCCATGCG ATGATGACCG ATCTCGCGGC CAAAGGCATG
GCGATCATCC TGATCTCATC CGAACTGCCG GAGCTGCTTG GCATGGCTGA TCGGATGATC
GTGCTGAGAG AAGGCTCGGT CACGGCCGAG TTTCGGCACG ATGAGGCCTC GCAGGAAAAG
GTGATCGGTG CAGCGACCGA CGCGATCGTC AAGAAGGTGG ATGGCGAGAT TGTTGCCAAG
CCGGTCCCGC ATCAAGACGA AAAATCGGAG ATCCCGGAAA GAGCGGCGCA GGGCACATGG
CGGCGGGTTC TGGCCCGCCG GGAATTGGGG CTCTTTGCGG CAATTGCGGC TGTTGTCATT
CCTATTTCGA TATTGAACAT ACGTATGCTC AGCGGCGCCA ATCTATCCGC CCTGGCAATG
GACGCCGGCC TTCTGATGAT CGTCGCGGTC GCCCAGATGC TTGTCGTGAT CACCCGCAGC
ATCGATCTTT CCGTGGCCGC GATCATCGGC CTTGCAGCCT ATGGAGCGGC CTCGACGATC
CATCTGCATC CCGAGATCGG CGTCATGGGT GGTGTCGCCC TGGCTTGTGT GATCGGGCTC
GCCGCAGGCT TCCTGAACGG GCTCATCGTC ACCTACGGCC GCGTGCCGGC CATCGTCGTC
ACGCTTGGCA CCATGTCCAT CTTCCGGGGC ATCAACAGCC TTTGGGCCGG CGGGACGCAG
GTGAGCGCCG ACCAGGTGCC GCAAGCCTGG CTTGATATGA CGGCAGCGAA TATTTTTGGG
GTTCCGGCTG TGCTCCTGAT CGCCATCGCC ACCCTGCTCG TCGTTGCCTA TATCCTCCGC
AATACCTCGA TCGGCCGGGA ACTGTTTGCC ATCGGTTCCA ATCCCGGCGG AGCGAGCCTC
ATCGGCATTC CCTCGCGTGC GCGCATCCTG ATGGCCTTTT CAGCAGCCGG GCTTCTGGCC
GGGTTCGATG GTGCGCTCTG GGCGTCCCGG TATGCCACGG TCGATGCACG CGTTGCCTAT
GGTTTCGAGT TGACCGTGAT TGCGGCTGTC GTCGTCGGGG GCATTGCCGT CCGCGGCGGC
TCCGGCACCG TGCTCGGCGT CGCCGCCGGC GCCTTGATGC TGCTTATCAT CAACAACGGG
CTGACACTCG TGCGTGTCGA TCCCCTCTGG CTGCAAGGGG TCTATGGCCT CGTCATTCTC
GCCGCCATCG GCATCGACGC ACTCGTCGCC CGCCGCGCCG CCGGCAAGCG CAAGGGAGCA
CATTGA
 
Protein sequence
MLDVSGRPKA AGTSATGQVV ASLEGVTKFF GGTVAVANVS IELRAGEVLA LLGENGAGKS 
TCVKLLAGVH RPDGGQVVML GKPVAFASPL EAQRAGVAVM HQHPGLFPDL SIAENLFIGQ
TGLRWKLDHR QMQSEAARLL TLVGLDVDVT APLGRLRTSE QQLVEIARAL SLDARVLIMD
EPTAALSQRE VERLFTVVDN LRPQGVAMMF VGHRMDEIYR VADRIAVLRD GRHVGTEIAA
DLSRERAVQM MVGRSLDGLY PRNNTAPGDV VLDVRGLSCD GSFQDVSFQL RAGEILGFGG
LVGSGRTEIA RVLFGIDQPT GGTIAIDGKT MRFASPKDAM GNGIAYVSED RIGQSLVMDF
PILNNASLTV LDKATRGGLM SREKEIGIAK PFLDRLRLRF KSFDQPVGAL SGGNQQKVVL
AKWLATNPRI LILDEPTQGI DVQTKADVHA MMTDLAAKGM AIILISSELP ELLGMADRMI
VLREGSVTAE FRHDEASQEK VIGAATDAIV KKVDGEIVAK PVPHQDEKSE IPERAAQGTW
RRVLARRELG LFAAIAAVVI PISILNIRML SGANLSALAM DAGLLMIVAV AQMLVVITRS
IDLSVAAIIG LAAYGAASTI HLHPEIGVMG GVALACVIGL AAGFLNGLIV TYGRVPAIVV
TLGTMSIFRG INSLWAGGTQ VSADQVPQAW LDMTAANIFG VPAVLLIAIA TLLVVAYILR
NTSIGRELFA IGSNPGGASL IGIPSRARIL MAFSAAGLLA GFDGALWASR YATVDARVAY
GFELTVIAAV VVGGIAVRGG SGTVLGVAAG ALMLLIINNG LTLVRVDPLW LQGVYGLVIL
AAIGIDALVA RRAAGKRKGA H