| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6005 |
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| Symbol | |
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| ID | 8016271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 32344 |
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| End bp | 34311 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644827317 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002978517 |
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| Protein GI | 241258633 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGC AAGCGCTTGT CGCCCCTTTG CTGGCGATGC CGCGTGTTGC CAAACGCGCC
CTGGCTTTGC TGGTGGATTC CAGCTTTTGT GTTCTGACGA TATGGCTGGC CTATTGCTTC
CGTTTGAACG AATGGACGGT GCTCACTGGT GTCCAGTGGT TGCCGGTCTT CGTTTCACTG
TGCATGGCCC TTCCCATCTT CATCGTCATG GGCATGTACC GGGCGATCTT CCGTTATGCC
AATATGGCTG CTTTCATTAC TGTTCTGAAG GCCATTGCGA TCTACGGCTT CGCCTTCATG
ACGATATTTA CAGCCCTCAG CGTACCGGGC GTTCCGAGAA CAGTCGGTAT TCTCCAGCCC
TTCCTGCTGT TGATTGCGAT CGGACTGTCG AGGTTGAGCA TCCGCTACTG GCTCGGGGAT
GCCTACCAGC GCATCCTTCA CAAGAATACG CTCGCCAAGG TGCTGATCTA TGGAGCAGGG
AAGGCCGGGC GGCAGCTGGC CGGTGCCTTG ATCAACAGTG CCGAACTCAA TGTCGTCGGC
TATCTGGATG ATGATCCGCG TCTCAAGGGC GGCGTCATGG GTGGTTTGCC GATCTACGAC
CCCTCGGATC TTCCGGTGCT TGCCGAATCT CTTGGCGTGC ACAACGTCCT TCTTGCTCTT
CCATCTGCAT CGCGGCAGCG TCGCAACGAA ATCCTGGAGC ACATCCGTAA AGCCAGGGTC
AATGTTCGCA CGTTGCCGGA TCTCACGGCC CTGGCTCAGG GACGCATCGC CGTCTCCGAC
ATCAGAGAGC TGGAGATCGA AGATCTGCTG GGGAGGGAAG CGGTCGCACC ACGGCAGGAG
TTGCTCGACA AGGCGATGCG CAAAAAGGTG GTTATGGTCA CGGGTGCTGG TGGCTCGATC
GGCGGCGAGT TATGCCGCCA GATTCTGCGC AACGAGCCTT CGAGCCTGAT CCTCATCGAT
CAGAACGAGT TTGCGCTTTA TAATATTCAT GCCGAATTGC AGAAGCTGGC CGAACTGTAC
AAACACGAAA ATACGCAGAT CGTCCCGATT CTCTGTTCTG TCCGCGATCA GGATCGCATG
GAACATGTCA TGCAGAGCTG GCGTCCTCAG ACGCTCTATC ATGCAGCCGC TTACAAGCAT
GTTCCCCTTG TCGAACACAA TGCCGTGGAA GGCATCAAGA ACAATGTGAT GGGTACGCTG
GTCGCGGCAC GCGCGGCGAA TAAATGCGGC GTCTCGAATT TCGTGCTGAT CAGTACAGAC
AAGGCCGTGC GTCCGACAAA TGTGATGGGC GCCAGCAAGA GGTTGGCAGA GATGGTTCTG
CAGGCGCTCG CAGCAGAATC GGCGACTGAC AGAATGCGAA CGAATTTCTC CATGGTCCGC
TTCGGAAACG TCCTCGGCTC CTCCGGATCT GTCGTGCCGC TTTTCAGGCA GCAGATCAAG
GAAGGCGGCC CGGTGACGCT GACGCATCCT GACATAACCC GCTATTTCAT GACCATTTCG
GAAGCCTCGC AGCTCGTCAT ACAGGCCGGC GCGATGGCCG ACGGCGGCGA TGTTTTCTTG
CTCGACATGG GGGAGCCCGT CCGCATCGCC GATCTCGCCC GCAAGATGGT CGAGCTTTCC
GGGCTGGCCG TCCGCGATGA GAACAATCCC GAAGGTGATA TCGAGCTTTC CGTTACCGGT
CTTCGGCCCG GCGAGAAGCT CTACGAAGAA CTTTTGATCG GCGACAACCC AGAAAGAACC
GAACATCCGC GCATTATGAA GGCGCGCGAG GATTTCCTCT TCTGGTCGGA GCTTTCGAAA
AAGCTCAACT CGCTCAATGC GGTATTGGAT CGGAACGATA TGGTCGCGGC ACGTGCGATG
TTGGCGGACC TCGTCTCCGG CTATTCCTCA ACAGGTGAGG TCTCGGATCT GGCTTTCAGC
GGCGCCGAGC CACTACGGCT GCCGCAGCCA ATTCAAAGCA CGTTGTAG
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| Protein sequence | MPLQALVAPL LAMPRVAKRA LALLVDSSFC VLTIWLAYCF RLNEWTVLTG VQWLPVFVSL
CMALPIFIVM GMYRAIFRYA NMAAFITVLK AIAIYGFAFM TIFTALSVPG VPRTVGILQP
FLLLIAIGLS RLSIRYWLGD AYQRILHKNT LAKVLIYGAG KAGRQLAGAL INSAELNVVG
YLDDDPRLKG GVMGGLPIYD PSDLPVLAES LGVHNVLLAL PSASRQRRNE ILEHIRKARV
NVRTLPDLTA LAQGRIAVSD IRELEIEDLL GREAVAPRQE LLDKAMRKKV VMVTGAGGSI
GGELCRQILR NEPSSLILID QNEFALYNIH AELQKLAELY KHENTQIVPI LCSVRDQDRM
EHVMQSWRPQ TLYHAAAYKH VPLVEHNAVE GIKNNVMGTL VAARAANKCG VSNFVLISTD
KAVRPTNVMG ASKRLAEMVL QALAAESATD RMRTNFSMVR FGNVLGSSGS VVPLFRQQIK
EGGPVTLTHP DITRYFMTIS EASQLVIQAG AMADGGDVFL LDMGEPVRIA DLARKMVELS
GLAVRDENNP EGDIELSVTG LRPGEKLYEE LLIGDNPERT EHPRIMKARE DFLFWSELSK
KLNSLNAVLD RNDMVAARAM LADLVSGYSS TGEVSDLAFS GAEPLRLPQP IQSTL
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