Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6004 |
Symbol | |
ID | 8016270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | + |
Start bp | 31041 |
End bp | 32315 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644827316 |
Product | O-antigen polymerase |
Protein accession | YP_002978516 |
Protein GI | 241258632 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.881514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTATT TGAGTCAACT CAAGATGGCA GTGCTTTATC CGGAGGATGA CGCCGGGAGC GCGCTCGACC GAAACAACCG CATTGCCGTC TTTCTCTTTG CGATCCTTCC GGGGCTTTCG CCGAACTTTA ACTCCTTCAT CCTCCTCGCG TCGATGGTGT GGGGCGTCTA CTGTCTGGCG ACGGGCCGCC TCGCCTTGAA TCTGTCGAGA TGCGACCGGC TGGTTGCCAT TTTCATGTCG ATCTACCCGC TGGTGATGAT CGCCAGCATT TTCATCAATC CCCCTTACTC CGAAGTACCG GACTGGATAT TCCGGCTGCT ACCTTTCTTT TCCATCTGGC TGATATTGCC GCGGATGCGC CAATCTCCCG ATGGCCGTCT CGTGCCGCTC TTTATCCTCG GCGCAGGCAT CGGTATGATC GTCACCTTTC TTTTCAGTCT CCTGCAGATC ATGTTTCTGA TGGAGAGAGC AGAGGCTGGG ACTTCGAACG CTGCGCTCCT GGGCGTGATA GGGATCCTGT TCGGCGGCAT CGCGCTTCTC AACGTTCAAT CTCCCAAAAG CGTGGAGCAA AGAATTGCAA TATTGGGATA TGCCGCCGGT CTGGGCTGCG TTCTGCTTTC GGGAACGCGC TCGGCCTGGC TGGTCATTCC CATCCATATC GTCATCTTCC TCTGGTATTT TCGCAAACAC AGCTTCCATC TAAGTTTGCG CAGCCTAGCT ATAACCAGCT CCTTGCTGTT GGCGGGACTT ATCACCCTGG GCAGCGGCCA GATCCTCCAT CGCATCCAGG CGCTTCAGGA AAATCTGACA TCGCTCGAAC GCACCGACGG CGAGATCACG TCGCTGAGTG CCCGATTCGC CTTGTACAAA GGCGCACTAT CGGCAATTAG TAAGGACCCG TTGACGGGTT ATGGCCCGCA AAACCGGATG AGTTCGGTTT TGGCAGAGCT GCCCGATAAC TTAAGGCCGC AGCTACCTTA CTCGCATGTC CACAACGGCT TTCTGACCGC AGGAATCGAC GCCGGCGTTT TCGGTATTGC GGCACTTTCG CTGATGCTAC TGACACCGGT GATAGGCGCG TTGAGAAAAG AAGCGGGACC GGGCCGGGAT TTAGCGATTG CGCTCGCTCT TCTGCTCGTC AGCAGCTACG TCATAACGGG CAGCTTTGGC ATCATGTTCA ATCAGAAAGC TTTGGATCCG ATCTTCGCTT ACCTCGTCGC CCTTATTTGT GCGGATCGCG GCAGCACGCG CTTTGCCCCC GTCGTCCGGA GCTGA
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Protein sequence | MNYLSQLKMA VLYPEDDAGS ALDRNNRIAV FLFAILPGLS PNFNSFILLA SMVWGVYCLA TGRLALNLSR CDRLVAIFMS IYPLVMIASI FINPPYSEVP DWIFRLLPFF SIWLILPRMR QSPDGRLVPL FILGAGIGMI VTFLFSLLQI MFLMERAEAG TSNAALLGVI GILFGGIALL NVQSPKSVEQ RIAILGYAAG LGCVLLSGTR SAWLVIPIHI VIFLWYFRKH SFHLSLRSLA ITSSLLLAGL ITLGSGQILH RIQALQENLT SLERTDGEIT SLSARFALYK GALSAISKDP LTGYGPQNRM SSVLAELPDN LRPQLPYSHV HNGFLTAGID AGVFGIAALS LMLLTPVIGA LRKEAGPGRD LAIALALLLV SSYVITGSFG IMFNQKALDP IFAYLVALIC ADRGSTRFAP VVRS
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