Gene Rleg_6000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6000 
Symbol 
ID8016266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp27777 
End bp28964 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID644827312 
Productmannonate dehydratase 
Protein accessionYP_002978512 
Protein GI241258628 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGG GTTGGAGATG GTTCGGACCG GAAGCGCCGG TGACGCTGGA TGATGTCCGC 
CAGACGGGCG CGACGAATAT CGTCTCTTCG CTGCATCAGG TGCCGATCGG CAGGGCCTGG
ACGGAGAAGG AAGTGCGCGA ACGGCAAGCT CTGATCGAGA CGACGCCCGG CGACCGTTCC
CCGCTCGTCT GGTCGGTGGT CGAGAGCATC CCGATCCCCG ACGCCGTCAA GCGCAAGGGC
GGGGAGGCAA AGGCCGAAAT CGAGGCGTGG ATCGCCAGTC TCGAAGCGGT CGCCGCCTGT
GGCATTCCGA TCGTCTGCTA TAATTTCATG CCGGTGGTGG ACTGGACTCG CACCGAACTC
GATTTCGTGA CACCGACCGG CGCCACCGCC ATGCGTTTCG ATCATGAACG TTTCGCAGCC
TTCGATCTCT TCATTCTGGA ACGGCCGGAT GCGGCGCAGC ACTATTCTAG TGAAGACCGC
GAACGGGCGC GTATCGTCTT CGAGGCGATG ACGGACGACG AGGTCGCCGA CATCACCCGC
ATCATCACCT CGGCTCTGCC GGGGTCGACC ACCGAACCTC TGACCATTCC GGCTTTCCGC
GACAAGCTCG TCGCCTATAG TGGTATCGAT GCCGCAAGAC TGCGCCGGCA CCTGATCGAA
TTCCTGGAGG CGGTGACGCC GGCTGCCGAA GCCCGCGGCG TCAAGCTGAC GCTGCATCCC
GATGATCCGC CGCGTTCGCT GTTCGGCCTG CCGCGCATTG CCTCGACGGC GGACGACTAT
GCCGCTCTCT TCGATGCGGT GCCATCGGCG GCGAACGGCA TGTGTTATTG CACCGGCAGC
CTCGGCGTCC GCGCCGAAAA CGACCTGCCG GCGATCGCCC GACGCCTTGC CTCGCGCATC
CATTTCGCCC ATCTGCGTGC TACGACGCGC GAGGGTGACG GCCGGACATT CCATGAAAGC
GCGCACCTGG AAGGCGACGT CGATATGGTC GCGGTTCTCA GCGAACTGGT CGCGGAAGAC
CGCCGCCGCA GTCCCGAAGA CACCATCGTG TTCCGATCGG ACCATGGCCA TCGCATGCTC
GACGACCTCG ACAAGGTCGT CACACCCGGC TACCCGGCGA TCGGCCGCAT GCGCGGCCTC
GCCGAACTGC GCGGTATCCT GCATGCGCTC GGTGCGCCGC CGAACTGA
 
Protein sequence
MRQGWRWFGP EAPVTLDDVR QTGATNIVSS LHQVPIGRAW TEKEVRERQA LIETTPGDRS 
PLVWSVVESI PIPDAVKRKG GEAKAEIEAW IASLEAVAAC GIPIVCYNFM PVVDWTRTEL
DFVTPTGATA MRFDHERFAA FDLFILERPD AAQHYSSEDR ERARIVFEAM TDDEVADITR
IITSALPGST TEPLTIPAFR DKLVAYSGID AARLRRHLIE FLEAVTPAAE ARGVKLTLHP
DDPPRSLFGL PRIASTADDY AALFDAVPSA ANGMCYCTGS LGVRAENDLP AIARRLASRI
HFAHLRATTR EGDGRTFHES AHLEGDVDMV AVLSELVAED RRRSPEDTIV FRSDHGHRML
DDLDKVVTPG YPAIGRMRGL AELRGILHAL GAPPN