| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5997 |
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| Symbol | |
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| ID | 8016263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012852 |
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| Strand | - |
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| Start bp | 23945 |
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| End bp | 25534 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644827309 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002978509 |
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| Protein GI | 241258625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.378354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA TCGCAGCAAC ATCAATCGCC GTTCCGCAGC CGAAAACCGG CGCCAGTACC
AGGGAATGGA TCGCCGTTCT CGCCGGCATG ATCGGCGCCT TCATGGCGAT CCTCAACATC
CAGATCACCA ATGCCTCGCT TCTCGACATC GAGGGCGGCA TCGGAACAGG CGTCGACAAC
GGCGCCTGGA TCTCCACCTC CTATCTGATT GGCGAGATCG TCGTTATCCC GCTGACGGCC
TATTTCAGCA ATGTCTTCTC TTTCCGCCGC TACATCCTCG TCAACTCAGT CCTCTTCCCG
CTGTTTTCGA TTGGCTGTGC CTTCGCCCAT GATCTCGGCA CGATGATCGT GCTGCGCGGC
CTGCAGGGTT TTGCCGGCGG CGTGCTGATC CCCATGGCCT TCACCATGGT GCTGACCAAG
CTGCCGAAGC ACCAGCAGCC GCTCGGCCTT GCGGCCTTCG CGCTCTCGGT CACCTTCGCG
CCGGCGATCG GCCCGACCAT CGGCGGTTAT CTCACCGAAA ACTATGGCTG GCAGACGATC
TTCTTCATCA ACGCCATCCC CAGCGCCATC ATGGCGGTCG CCCTTGCCCT GACGCTCGAC
AAGCAGCCGA TGCAGCTCGG CCTGCTCAGG GAAGGTGACT GGGCGGGGAT CATCAGCATG
GCGATCGGCC TCTCGGCGCT GCAGACGGTG CTCGAAGAAG GCAACAAGGA GGACTGGTTC
TCCTCGCCCT TCATCGTCAA GCTGAGCATC CTCGCCTTCG TCTTCCTCGT CGCCTTCATC
TGGATCGAGC TGACGGTGGA GAAGCCGCTG GTCAAGCTGC GCCTGCTTAA GCAGCGCAAT
TTCGGCATCG GCGTTGCCGT CAACGTGCTG GTCGGCGTCG CCCTTTTCGG CACCGTCTAT
ATCCTGCCGC AATATCTCGG CCAGGTGCAG CGCTATAATG CCGAGCAGAT CGGCAATGTG
CTGGCATGGA CCGGCCTGCC GCAGCTGCTT TTGATCCCGC TCGTGCCGAT GATGATGAAG
CGCTTCGATG CGCGTTACAT CGGCTTCCTC GGCATCTCGA TCTTCGCGAT CAGCTGCTTC
ATGAACATCA CCTTGTCAGC CGATACCGCA GGCGACCAGT TCTGGATCCC GAACATCGTC
CGCGCCATCG GCCAGGCGCT GGTGCTGACG CCGATCACCG CGATCACCAC TGCCGGCATC
GCGCCTTCCG ATGCGGCCGC CGCCTCGGGC CTCACCAACA TGCTGCGCAA TCTCGGCGGC
GCCGTCGGCA CGGCAACGCT CGGCACGGTG CTGACCAAAC GCGAGCAGTT TCACTCGAAC
ATCATCGGCC AGTCGGTGAC GCTCGGCCGT GACGAAGTGC GCAACCGCCT CGACCAGTTG
ACAGGCTACT TCCTGCAGCA TGGTGTTTCC GACCATGCCG TAGCAACCCA GAAGGCTATC
GTGGCGCTTG GGCAGGTCGT CAAACGCCAG GCCCTGATCC TGGGTTTTGC CGATACCTTC
GCCGTCATCG GCGTGGTTCT TGCCATTGCA GCCGTCGCCC TTCTGCTCAC CCAAAAACCG
CGGGCCGGTG GTGGCGCCGG CGCTCATTGA
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| Protein sequence | MSTIAATSIA VPQPKTGAST REWIAVLAGM IGAFMAILNI QITNASLLDI EGGIGTGVDN
GAWISTSYLI GEIVVIPLTA YFSNVFSFRR YILVNSVLFP LFSIGCAFAH DLGTMIVLRG
LQGFAGGVLI PMAFTMVLTK LPKHQQPLGL AAFALSVTFA PAIGPTIGGY LTENYGWQTI
FFINAIPSAI MAVALALTLD KQPMQLGLLR EGDWAGIISM AIGLSALQTV LEEGNKEDWF
SSPFIVKLSI LAFVFLVAFI WIELTVEKPL VKLRLLKQRN FGIGVAVNVL VGVALFGTVY
ILPQYLGQVQ RYNAEQIGNV LAWTGLPQLL LIPLVPMMMK RFDARYIGFL GISIFAISCF
MNITLSADTA GDQFWIPNIV RAIGQALVLT PITAITTAGI APSDAAAASG LTNMLRNLGG
AVGTATLGTV LTKREQFHSN IIGQSVTLGR DEVRNRLDQL TGYFLQHGVS DHAVATQKAI
VALGQVVKRQ ALILGFADTF AVIGVVLAIA AVALLLTQKP RAGGGAGAH
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