Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5994 |
Symbol | |
ID | 8016260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 20766 |
End bp | 22388 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644827306 |
Product | ABC transporter related |
Protein accession | YP_002978506 |
Protein GI | 241258622 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.273688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA TCGAAAATAT CAGCAAGCAG CTCAGCCACC GTATCCTCTT CATCGAGGCA TCCGCGGCTC TTAACAGAGG CGAGAAGATC GGCCTTGTTG GTCCGAACGG CGCCGGCAAG ACAACGGTCT TCCGGATGAT CAACGGCGAG GAGCAGCCCG ACGAGGGGCA GGTCTCCGTC GAGAGGGGCG TCACCATCGG CTATTTCAAC CAGGATGTCG GCGAGATGGC CGGCCACAGC GCCGTCGCCG AGGTGATGAA CGGCGCCGGT CCGGTCAGCA TCGTTGCCGG CGAATTGCGC GATCTGGAGG CGGCCATGGC CGATCCCGAA CAAGCCGACA ACATGGAAGA GATCATCGAG CGTTACGGCG AGGTGCAGGC GCGTTACGAG GAACTGGACG GTTATGCGCT CGAAGGCCGC GCCCGCGAAG TGCTCGCGGG GCTGAGCTTC AGCCAGGAGA TGATGGACGG CGATGTCGGT GCGCTGTCGG GCGGCTGGAA GATGCGCGTG GCGCTTGCCC GCATTCTCCT CATGCGTCCC GATGTCATGC TGCTCGACGA ACCGAGCAAC CATCTGGATC TCGAAAGCCT GATCTGGTTG GAGGAATTCC TGAAAGGTTA TGAGGGCGCG CTGCTGATGA CCTCGCACGA CCGCGAGTTC ATGAACCGCA TCGTCACCAA GATCATCGAG ATCGATGCGG GCACGCTGAC GGCCTATTCC GGCGACTATG AATTCTACGA GCAGCAGCGG GCGCAGAACG AGAAGCAGCA GCAGGCCCAG TTCGAACGCC AGCAGGCGAT GCTCGCCAAG GAAATCAAGT TCATCGAGCG GTTCAAGGCG CGCGCCTCGC ATGCCTCGCA GGTGCAGAGC CGGGTGAAGA AGCTGGAGAA GATCGACCGG GTGGAGCCGC CCAAGCGCCG CCAAATCGTT TCCTTCGAGT TCCAGCCGGC GCCGCGCTCC GGCGAAGACG TGGTCAACCT GAAGAACGTT CACAAGAAAT ACGGCAGCCG AAGCATCTAT GAGGGGTTCG ACTTCGTCGT GCGGCGCCGG GAGCGCTGGT GCATCATGGG CATCAACGGC GCCGGCAAGT CGACGCTGCT GAAGCTGGTA ACGGGCTCGA CCGCGCCTGA TCAGGGCAGC GTTGCGCTGG GCGCCAGCGT CAAGATGGGT TATTTCGCCC AGCACGCCAT GGATATTCTC GACGGCGAGC GGACCGTCTT CCAGATGCTG GAAGACCAGT TTCCCCAGGC CGGGCAGGGG CCTTTGCGCG CGCTGGCCGG ATGCTTCGGT TTCTCCGGCG ACGATGTCGA GAAGCGGTGC CGGGTCCTGT CAGGCGGCGA GAAGGCGCGG CTGGTCATGG CGATCATGCT GTTCGACCCG CCGAACCTGC TCGTGCTCGA CGAACCGACG AACCATCTCG ACCTCGACAC CAAGGAGATG CTGATCAAGG CGCTGTCGCA ATATGAGGGC ACGATGCTGT TCGTTTCGCA CGATCGGCAT TTCCTGGCAG CACTCTCCAA CCGGGTGCTG GAACTGACGC CCGAGGGTGT CCACCAATAT GGCGGCGGCT ACACCGAATA TGTAGCGCGC ACCGGCCACG AGGCGCCCGG CCTGCGAAGC TGA
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Protein sequence | MIRIENISKQ LSHRILFIEA SAALNRGEKI GLVGPNGAGK TTVFRMINGE EQPDEGQVSV ERGVTIGYFN QDVGEMAGHS AVAEVMNGAG PVSIVAGELR DLEAAMADPE QADNMEEIIE RYGEVQARYE ELDGYALEGR AREVLAGLSF SQEMMDGDVG ALSGGWKMRV ALARILLMRP DVMLLDEPSN HLDLESLIWL EEFLKGYEGA LLMTSHDREF MNRIVTKIIE IDAGTLTAYS GDYEFYEQQR AQNEKQQQAQ FERQQAMLAK EIKFIERFKA RASHASQVQS RVKKLEKIDR VEPPKRRQIV SFEFQPAPRS GEDVVNLKNV HKKYGSRSIY EGFDFVVRRR ERWCIMGING AGKSTLLKLV TGSTAPDQGS VALGASVKMG YFAQHAMDIL DGERTVFQML EDQFPQAGQG PLRALAGCFG FSGDDVEKRC RVLSGGEKAR LVMAIMLFDP PNLLVLDEPT NHLDLDTKEM LIKALSQYEG TMLFVSHDRH FLAALSNRVL ELTPEGVHQY GGGYTEYVAR TGHEAPGLRS
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