Gene Rleg_5994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5994 
Symbol 
ID8016260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp20766 
End bp22388 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content63% 
IMG OID644827306 
ProductABC transporter related 
Protein accessionYP_002978506 
Protein GI241258622 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.273688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA TCGAAAATAT CAGCAAGCAG CTCAGCCACC GTATCCTCTT CATCGAGGCA 
TCCGCGGCTC TTAACAGAGG CGAGAAGATC GGCCTTGTTG GTCCGAACGG CGCCGGCAAG
ACAACGGTCT TCCGGATGAT CAACGGCGAG GAGCAGCCCG ACGAGGGGCA GGTCTCCGTC
GAGAGGGGCG TCACCATCGG CTATTTCAAC CAGGATGTCG GCGAGATGGC CGGCCACAGC
GCCGTCGCCG AGGTGATGAA CGGCGCCGGT CCGGTCAGCA TCGTTGCCGG CGAATTGCGC
GATCTGGAGG CGGCCATGGC CGATCCCGAA CAAGCCGACA ACATGGAAGA GATCATCGAG
CGTTACGGCG AGGTGCAGGC GCGTTACGAG GAACTGGACG GTTATGCGCT CGAAGGCCGC
GCCCGCGAAG TGCTCGCGGG GCTGAGCTTC AGCCAGGAGA TGATGGACGG CGATGTCGGT
GCGCTGTCGG GCGGCTGGAA GATGCGCGTG GCGCTTGCCC GCATTCTCCT CATGCGTCCC
GATGTCATGC TGCTCGACGA ACCGAGCAAC CATCTGGATC TCGAAAGCCT GATCTGGTTG
GAGGAATTCC TGAAAGGTTA TGAGGGCGCG CTGCTGATGA CCTCGCACGA CCGCGAGTTC
ATGAACCGCA TCGTCACCAA GATCATCGAG ATCGATGCGG GCACGCTGAC GGCCTATTCC
GGCGACTATG AATTCTACGA GCAGCAGCGG GCGCAGAACG AGAAGCAGCA GCAGGCCCAG
TTCGAACGCC AGCAGGCGAT GCTCGCCAAG GAAATCAAGT TCATCGAGCG GTTCAAGGCG
CGCGCCTCGC ATGCCTCGCA GGTGCAGAGC CGGGTGAAGA AGCTGGAGAA GATCGACCGG
GTGGAGCCGC CCAAGCGCCG CCAAATCGTT TCCTTCGAGT TCCAGCCGGC GCCGCGCTCC
GGCGAAGACG TGGTCAACCT GAAGAACGTT CACAAGAAAT ACGGCAGCCG AAGCATCTAT
GAGGGGTTCG ACTTCGTCGT GCGGCGCCGG GAGCGCTGGT GCATCATGGG CATCAACGGC
GCCGGCAAGT CGACGCTGCT GAAGCTGGTA ACGGGCTCGA CCGCGCCTGA TCAGGGCAGC
GTTGCGCTGG GCGCCAGCGT CAAGATGGGT TATTTCGCCC AGCACGCCAT GGATATTCTC
GACGGCGAGC GGACCGTCTT CCAGATGCTG GAAGACCAGT TTCCCCAGGC CGGGCAGGGG
CCTTTGCGCG CGCTGGCCGG ATGCTTCGGT TTCTCCGGCG ACGATGTCGA GAAGCGGTGC
CGGGTCCTGT CAGGCGGCGA GAAGGCGCGG CTGGTCATGG CGATCATGCT GTTCGACCCG
CCGAACCTGC TCGTGCTCGA CGAACCGACG AACCATCTCG ACCTCGACAC CAAGGAGATG
CTGATCAAGG CGCTGTCGCA ATATGAGGGC ACGATGCTGT TCGTTTCGCA CGATCGGCAT
TTCCTGGCAG CACTCTCCAA CCGGGTGCTG GAACTGACGC CCGAGGGTGT CCACCAATAT
GGCGGCGGCT ACACCGAATA TGTAGCGCGC ACCGGCCACG AGGCGCCCGG CCTGCGAAGC
TGA
 
Protein sequence
MIRIENISKQ LSHRILFIEA SAALNRGEKI GLVGPNGAGK TTVFRMINGE EQPDEGQVSV 
ERGVTIGYFN QDVGEMAGHS AVAEVMNGAG PVSIVAGELR DLEAAMADPE QADNMEEIIE
RYGEVQARYE ELDGYALEGR AREVLAGLSF SQEMMDGDVG ALSGGWKMRV ALARILLMRP
DVMLLDEPSN HLDLESLIWL EEFLKGYEGA LLMTSHDREF MNRIVTKIIE IDAGTLTAYS
GDYEFYEQQR AQNEKQQQAQ FERQQAMLAK EIKFIERFKA RASHASQVQS RVKKLEKIDR
VEPPKRRQIV SFEFQPAPRS GEDVVNLKNV HKKYGSRSIY EGFDFVVRRR ERWCIMGING
AGKSTLLKLV TGSTAPDQGS VALGASVKMG YFAQHAMDIL DGERTVFQML EDQFPQAGQG
PLRALAGCFG FSGDDVEKRC RVLSGGEKAR LVMAIMLFDP PNLLVLDEPT NHLDLDTKEM
LIKALSQYEG TMLFVSHDRH FLAALSNRVL ELTPEGVHQY GGGYTEYVAR TGHEAPGLRS