Gene Rleg_5974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5974 
Symbol 
ID8016332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp2701 
End bp3720 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID644827286 
Productinner-membrane translocator 
Protein accessionYP_002978486 
Protein GI241258602 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTG AAGTAGAATT CGCGCCTTCC GGTTTTTCCG CTGCGGAACC GCCTCCCCGG 
CCGGCCGGCA ATATTGCAGC GACCGCGTTG CGCTTCGGAT CGCTGATCGC TTTCGCCGCC
ATCCTGATCA TCTTTTCGCT GACCGCACCC TATTTCCTCA GCATCGGCAA TATAGGCAAC
GTACTTGGTC AATCGGCCAT CTCCGGTGTG CTTGCCATCG GGTTGACGAT CGTGTTGATT
GCCGGCGGCT CCAATGTCGT CACCGGCGGC ATCGACCTGT CGCTGGCTGC CAATATGGGC
CTCAGCGCTG CCGTCTATGC GAGCCTGACG CAGCTCGGCT ACGGCGATGC GACGGCGATT
GCGGCGGCGA TCCTCACCGG CGCCCTGATC GGCACGGTCA ATGCCATTGC CATCGTCTAT
GCCGGCATCG TGCCGCTGCT GGCCACGCTT GCCGTCATGA ACGTCGTCGC CGGCCTGGAA
TTGGTGCTGA CCGGCAATAC CGTCCTGCCG GCCTCGACGC CTTTCCTGTC GGCGCTCTCG
GCCTCGGATG CTTTCGGCAT CCCGGTTCTT GCCTATGTGC TCCTTGGCTT CACGGCCATC
ACCACGGCGA TCGTGCAATA TACCCCGCTC GGCCTGCGCC TCTATGCCGT CGGTGAGTTT
CCGGATGCGG CGCGTGCCGC CGGTCTGCCG CTTCGCCGAC TGCTGGCCGG CGCCTTCGTT
GCCAGCGGCG TCTCCGGCGG CATCGCTGGC ATCCTATCGG TTTCCTATCT GAGCGGCAGC
ACGACCGGCG CTGGCGAGAT GCTGTTGCCC GTCGTCGTGA CGGCCCTCCT CGGCTCGGTC
TTTTCGCGCC GGCTGGTTCC GACGATCACC GGGACGCTGC TTTCGGCCCT TTTGGTCGGC
TTCCTGGTCA ATGGTTTCCA GCTGCTGAAC ATTTCGAGCA CGCTGGTCAG CGGCGTCCAG
GGCGTGCTCA TTCTCATCGT CGTTTCTGCG ACCACGCTGC TGCGCCGGCA GGAGGCCTGA
 
Protein sequence
MSAEVEFAPS GFSAAEPPPR PAGNIAATAL RFGSLIAFAA ILIIFSLTAP YFLSIGNIGN 
VLGQSAISGV LAIGLTIVLI AGGSNVVTGG IDLSLAANMG LSAAVYASLT QLGYGDATAI
AAAILTGALI GTVNAIAIVY AGIVPLLATL AVMNVVAGLE LVLTGNTVLP ASTPFLSALS
ASDAFGIPVL AYVLLGFTAI TTAIVQYTPL GLRLYAVGEF PDAARAAGLP LRRLLAGAFV
ASGVSGGIAG ILSVSYLSGS TTGAGEMLLP VVVTALLGSV FSRRLVPTIT GTLLSALLVG
FLVNGFQLLN ISSTLVSGVQ GVLILIVVSA TTLLRRQEA