Gene Rpic12D_5427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5427 
Symbol 
ID8015999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012851 
Strand
Start bp31631 
End bp32656 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content57% 
IMG OID644827258 
ProductSCP-like extracellular 
Protein accessionYP_002978458 
Protein GI241258192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAACA CCAGCCAAAC AATCTGCATC ACCAAGTCGC TTGCCTCGCT CTCCCTCGTT 
GCCGCACTCG CAGCGTGCGG TGGTGGCGGT GGAGACAGTA GCACTTCCTC GTCGACAAGC
GGATCTTCAA GTTCGTCAGG AGGATCGACG TCGCAAACCG TAACTGGCAC GCTATCAACG
CCTCAATACA CGAGCGGCAG CGCGCAAATC ACGGCCTTCA ATCTGCTCAA TCAATACCGT
GCCCAGTGCG GCATTCCCGC GCTGCAGGAG AACACCGTAC TGGATCAGGC AGCACAGAGC
CATGCAAAGT ACATGGGCCT CAACAGCGCC ATATCGGATA GCGAAACATC GGGAAGCACT
GGATTTACCG GTGCGTCTTA TCAAGATCGA GCGGTGGCCG CAGGATTGCC GACTTCCACG
TTTAGCACAG GTGTGAGCGG AGGTGCTTCG ATCACAACTA ACGGCTTTAC GGCTGCTCAA
GCAGGGCAGA TGTTTGTCAA TTCCCTGCTG GCGGGGGTGT ACCACGCTGC AATCGTTGCT
TACCCTTCCA ATACGATGGG GATTGGGGAA TACGAAACGC AATCTACCAG CAGTGGTCTG
GCTTGGACGA ATGCGTGGGA AAGCATCAGC GTGCTGGTCA GCCAGTCTTC GATTTTTAGC
AACACGCCGC TTACGTTCCC CTGCCAAGGG GTTACCGGTG TGCCGTATAA ATCGACAAGC
GAGAGCCCCA CTCCGCCGAA CGTCTCGAAC TCGGGCTGGG GCACGCCGGT TGTCGTGATG
GGCAACACGT CCGACACGAT CATCCTGCAG AACGCATCCA TGACTGGCCC GTCAGGCAGC
GTTGCACTTC AGATCCTGAA TTCGACAACT GACCCGAACA AAGCTCTTGG TGCATATCAG
GCCGTCGCCT ACCCGACGTC GCCGCTGCTG CCGAATACGC AGTATTCGGT CACTCTGACC
GGCACCGTCA ACGGCACGGC GTTCTCGCGT AACTTTACGT TCACGACCGG CAATGTCGTG
GGTTAA
 
Protein sequence
MRNTSQTICI TKSLASLSLV AALAACGGGG GDSSTSSSTS GSSSSSGGST SQTVTGTLST 
PQYTSGSAQI TAFNLLNQYR AQCGIPALQE NTVLDQAAQS HAKYMGLNSA ISDSETSGST
GFTGASYQDR AVAAGLPTST FSTGVSGGAS ITTNGFTAAQ AGQMFVNSLL AGVYHAAIVA
YPSNTMGIGE YETQSTSSGL AWTNAWESIS VLVSQSSIFS NTPLTFPCQG VTGVPYKSTS
ESPTPPNVSN SGWGTPVVVM GNTSDTIILQ NASMTGPSGS VALQILNSTT DPNKALGAYQ
AVAYPTSPLL PNTQYSVTLT GTVNGTAFSR NFTFTTGNVV G