Gene Rpic12D_5390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5390 
Symbol 
ID8015962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012851 
Strand- 
Start bp2155 
End bp2808 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID644827222 
Producthypothetical protein 
Protein accessionYP_002978422 
Protein GI241258156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.467019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCATG CCAATCGTGA AGCCTGGTTG AACCATGTTG CGCGCCGCAT GGCGCCAATG 
TTCGCAGCGC TCGATGCCCC GCTGCCTGGT CGGATTCGGA TCGCCATCGG ATTCACGTCG 
ACAGGCCAGC GCGGTAAGCG GATTGGCGAG TGCTGGGACA CCAGCTGCAG CGAAGATGCA 
CACTTCGAGA TCTTCATCCG GCCTGACCTG GTGGAGTCGG CCGACCTGAT GCCCATGCAA 
GTCGCCGCGA TCCTTGCGCA CGAGCTCGTG CACGCCGCGG TCGGCCTCGA TGCTGGCCAC 
CGCAAGCCCT TTCGGGATGT TGCGGTCGGG ATTGGCCTGA AGGGTCCGAT GCGATCAACG 
ACGGCCGGCC CGCGCTTTGA GGAAAGCGTC ACGCCAATCC TGGACGACGC CGGGCCACTG 
CCGCATGCGC GCTTGCGGAC CAGGCCAGAC GCAGATAGCT CGGACGATGG CGAGGCGCCA 
GGGATCAAGA CGACGGCGCC GAAGAAACAG ACGCGGCGGC ACATCAAGTG CAAGTGCGGC 
AGCTGCGGCT ACACGGCCCG GACTTCTCGG AAGTGGCTAG ATCTCGTCGG GGCGCCCCTC 
TGCCCCAAGC ATGGCGCCAT GGCCGTGTGC GCGCAGGACG ATGGCCAGGA CTAG
 
Protein sequence
MRHANREAWL NHVARRMAPM FAALDAPLPG RIRIAIGFTS TGQRGKRIGE CWDTSCSEDA 
HFEIFIRPDL VESADLMPMQ VAAILAHELV HAAVGLDAGH RKPFRDVAVG IGLKGPMRST 
TAGPRFEESV TPILDDAGPL PHARLRTRPD ADSSDDGEAP GIKTTAPKKQ TRRHIKCKCG 
SCGYTARTSR KWLDLVGAPL CPKHGAMAVC AQDDGQD