Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4597 |
Symbol | |
ID | 8015344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4721702 |
End bp | 4722688 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644827174 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002978374 |
Protein GI | 241207278 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0491755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAATT TTTTGAAGCG TGAATCCGTC TTGATCAATG CGCCGCGCCG TGCGGCATTG AAGCTTGGAC TTGCCGGCAC CTTGGTGCTT GCGCTGTCCT GTGGCGTGTC GCCCGCCTTT GCGGCCGGCA AGCCGAAGGT CGGCCTGATC ATGAAATCCT TGTCCAATGA GTTCTTCAAG CAGATGAAGG CCGGCGCCGA CAAATATGCG GCCGAAAACA AGGACAAGTT CGACTTCAAG GCCGTCGGCA TGAAGGATGA GCGTGATTTC GCGTCCCAGG TCGATGCCGT CGAAAACTTC GTCACGCAGA AATACGATAT CATCGTTGTT GCGCCGGCCG ATTCAAAGGC CATGGCAACC CCGCTGGCAA AGGCAGTCAA GGCTGGCGTC AAGGTCATCA ACATCGATGT GCCGCTCGAT GCCGATGCGA AGAAGAAAGC CGGTATCGAT CTCGCTTTCT TCGGGCCTGA CAATAAGGGC GGGGCGACGC TTGCGGGCGA CGCGCTTGCC AAGGATCTGG GGCCTGGCGC CAAGGTCGTC ATCCTCGAGG GTAACCCCGA GGCCGACAAT GCCAAGGAGC GCAAGGAAGG CTTCATGGAC TCCGTCAAGT CTGGCAAGCT TGAGCTTCTC GACAGCAAGA CGGCCCATTG GGAGACGGAG GAAGCCAATA CCGTCATGAC GAATTTCCTG ACGAAGTATA AGGATATTCA GGGCGTTATG GCAGCCAACG ACTCGATGGC TCTCGGCGTT GTCAAGGCGC TCGATGCGGC CGGCCAGAGT GGCAAGATCA AGGTTGTCGG CTTCGATAAC ATTCCGCCGG TTCAGCCGCT GATCAAGGAT GGCAAGATGC TTGCCACTGT CGAACAGTAT GGCGCGCAGA TGGCGGTCCT CGGCATCCAG TATGGCATGC GTGAACTTGC CGGCGAGAAA TTCACCGGCT GGGTCAAGAC CGACATCAAG CTGGTCACCG CAGCGGATCT CAAATAG
|
Protein sequence | MSNFLKRESV LINAPRRAAL KLGLAGTLVL ALSCGVSPAF AAGKPKVGLI MKSLSNEFFK QMKAGADKYA AENKDKFDFK AVGMKDERDF ASQVDAVENF VTQKYDIIVV APADSKAMAT PLAKAVKAGV KVINIDVPLD ADAKKKAGID LAFFGPDNKG GATLAGDALA KDLGPGAKVV ILEGNPEADN AKERKEGFMD SVKSGKLELL DSKTAHWETE EANTVMTNFL TKYKDIQGVM AANDSMALGV VKALDAAGQS GKIKVVGFDN IPPVQPLIKD GKMLATVEQY GAQMAVLGIQ YGMRELAGEK FTGWVKTDIK LVTAADLK
|
| |