| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4592 |
|---|
| Symbol | |
|---|
| ID | 8015339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4717046 |
|---|
| End bp | 4718164 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644827169 |
|---|
| Product | DNA polymerase III subunit beta |
|---|
| Protein accession | YP_002978369 |
|---|
| Protein GI | 241207273 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0352599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTA CTATTGAGCG GTCAAACCTG TTGAAATCGC TGAACCACGT CCACCGCGTG
GTCGAACGTC GCAACACGAT CCCGATCCTG TCCAACGTAT TGCTCAAAGC CGACGGCCAG
AAGCTCGATA TGAAGGCGAC CGACCTCGAC CTCGAAATCA CCGAGGCGAC ACCTGCTAGC
GTCGAGCAGC CCGGCGCCAC CACCGTTCCC GCGCATCTTC TCTACGACAT CGTGCGCAAG
CTTTCCGACG GATCGGAAGT GCTGCTTGCC ACCAGCCCCG ATGGCGGCGC GATGACCGTG
CAGTCCGGCC GCTCGAAATT CTCGCTGCAA TGCCTGCCGG AATCGGACTT CCCTGATCTC
ACGGCCGGCA CCTTCACGCA TTCCTTCAAG CTGAAGGCGG CCGATCTGAA GATGCTGATC
GACCGCACCC AATTCGCGAT TTCGACGGAA GAGACGCGTT ATTATCTGAA CGGCATCTTC
TTCCACACGA TCGAGAGCAA CGGCCAGCTG AAGCTCAGGG CGGTTGCGAC CGACGGCCAC
CGGCTGGCGC GCGCCGATGT CGATGCGCCT TCCGGCTCCG AGGGGATGCC CGGCATCATC
ATTCCGCGCA AGACGGTCGG CGAGCTGCAG AAGCTGGTCG ACAATCCCGA GGTAATGGTG
ACCGTCGAGG TCTCCGACGC CAAGATCCGG CTGACGATCG GCTCGATCGT CATGACCTCG
AAACTGATCG ACGGCACCTT CCCGGATTAT CAGCGCGTCA TCCCCACCGG CAACGACAAG
GAAATGCGGG TCGACTGCAC GAGTTTCGCA CAGGCCGTCG ACCGCGTCTC GACGATCTCC
TCCGAGCGCG GCCGCGCCGT CAAGCTGGCG CTTTCCGAGG GGCAGTTGAT GCTGACCGTC
AACAATCCCG ATTCCGGCAG CGCGACGGAA GAAGTTGCCG TCGGCTACGA CACGGATGCG
ATGGAAATCG GCTTTAATGC CAAATACTTG CTCGACATCA CCGCCCAGCT TTCCGGCGAG
GAAGCGATCT TCCTGCTTGC CGATGCCGGC TCGCCGACGC TGATCCGCGA CACGGCGGGC
GACGATGCGC TCTACGTGCT GATGCCGATG CGCGTCTGA
|
|---|
| Protein sequence | MRITIERSNL LKSLNHVHRV VERRNTIPIL SNVLLKADGQ KLDMKATDLD LEITEATPAS
VEQPGATTVP AHLLYDIVRK LSDGSEVLLA TSPDGGAMTV QSGRSKFSLQ CLPESDFPDL
TAGTFTHSFK LKAADLKMLI DRTQFAISTE ETRYYLNGIF FHTIESNGQL KLRAVATDGH
RLARADVDAP SGSEGMPGII IPRKTVGELQ KLVDNPEVMV TVEVSDAKIR LTIGSIVMTS
KLIDGTFPDY QRVIPTGNDK EMRVDCTSFA QAVDRVSTIS SERGRAVKLA LSEGQLMLTV
NNPDSGSATE EVAVGYDTDA MEIGFNAKYL LDITAQLSGE EAIFLLADAG SPTLIRDTAG
DDALYVLMPM RV
|
|---|
| |