Gene Rleg_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4588 
Symbol 
ID8015337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4714088 
End bp4714795 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID644827165 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002978365 
Protein GI241207269 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.253572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC GCGAGCGGTT GATCGTCGGC CTGGATGTTC CAACGATCGG CGAGGCGGAA 
AGACTGGTTT CCACGCTCGG CGACGACATT CTCTTCTACA AGATCGGCTA TCAGCTGGTC
TTTGCCGGCG GCCTGGAATT CGCCCGTGAT CTTGCCGCAA GCGGCAAGAA GATCTTTCTC
GACATGAAGC TGCTCGACAT CGACAACACT GTCGCCTCCG GCGTCGAGAA CATCGCCAAG
ATGGGCATGT CGATGCTGAC GCTGCATGCC TATCCGAAAG CCATGAAGGC AGCGGTCGAG
GCCGCAGCCG GCTCCGGCCT CTGCCTGCTC GGCGTGACCG TGCTGACCTC GATGGATGCC
GACGACCTTG CCGAGGCGGG CTACAGCCAG GATCCGCACA GCCTGGTGCT GCGCCGCGCC
GAACAGGCGC GCGCAGCCGG CATGGGCGGT ATCGTCTGCT CGGCGGAAGA AGCGGCTGCA
GTGCGCGAAA TCGTCGGACC CGACATGGCC ATCGTCACCC CCGGCATTCG CCCTGATGGT
AGCGACAAGG GCGACCAGAA GCGGGTGATG ACGCCTTTCG ACGCGCTGAA GGCGGGAGCG
ACGCATCTCG TTGTCGGCCG GCCTGTCGTC AAGGCTCCGG ATCCCCGCGA TGCCGCCCGC
GCGATCCTCA GCGAGATGGT GAGCGCGCTC TGGCCGGCAA ATCGCTGA
 
Protein sequence
MDARERLIVG LDVPTIGEAE RLVSTLGDDI LFYKIGYQLV FAGGLEFARD LAASGKKIFL 
DMKLLDIDNT VASGVENIAK MGMSMLTLHA YPKAMKAAVE AAAGSGLCLL GVTVLTSMDA
DDLAEAGYSQ DPHSLVLRRA EQARAAGMGG IVCSAEEAAA VREIVGPDMA IVTPGIRPDG
SDKGDQKRVM TPFDALKAGA THLVVGRPVV KAPDPRDAAR AILSEMVSAL WPANR