Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4559 |
Symbol | |
ID | 8015314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4686496 |
End bp | 4687230 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644827136 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002978336 |
Protein GI | 241207240 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0125509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA TCAAAGGGAA AGTCATTGCC ATCACCGGCG CCAGCAGCGG CATCGGAGAG GCCGCGGCAA AGGTGCTGGC TGCCGCAGGC GCCCATATCG TCATCGGCGC CCGCCGCACC GAGCGCCTGG AGGAACTCGC CGGCGAAATC GCCGCAAAGG GCGGGTCGGT GCGCCGGCGA CAGCTTGACG TCACCGACCG TTCCCAGGTG GAAGCCTTTG CAGGCTTCGC CCGCTCCGAA TTCGGACGGC TGGACGTTAT CGTCAACAAT GCCGGCGTCA TGCCGCTGTC GCTACTCGAC GCCCTCAAGG TCGACGAATG GGACCGGATG GTCGACGTCA ATATCAAGGG TGTTCTCTAT GGCGTTGCGG CGGCGCTTCC GATCATGAAG GCGCAGGGAT CAGGGCAGAT CATCAACCTG TCTTCGATCG GCGGCCACAG CGTCTCTCCG ACGGCGGTTG TCTATTGCGC GACGAAATTC GCGGTACGGG CGATCTCGGA CGGACTGCGG CAGGAGTCCG ATCGTATCCG CGTCACCGTC ATCTCTCCGG GCACGACGAC ATCGGAACTC GCCGACACCA TCACCGATCC GACGGCGCGT GATGCCATGA AGGCTTTCAG GGCGATCACC ATCAGCCCCG AGGCCGTCGC CAATTCGATC CTCTACGCCG TCAGCCAGCC TGATGATGTC GATGTCAGCG AGATCATCAT CCGACCGACA GCCAGCCCCT ATTGA
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Protein sequence | MSDIKGKVIA ITGASSGIGE AAAKVLAAAG AHIVIGARRT ERLEELAGEI AAKGGSVRRR QLDVTDRSQV EAFAGFARSE FGRLDVIVNN AGVMPLSLLD ALKVDEWDRM VDVNIKGVLY GVAAALPIMK AQGSGQIINL SSIGGHSVSP TAVVYCATKF AVRAISDGLR QESDRIRVTV ISPGTTTSEL ADTITDPTAR DAMKAFRAIT ISPEAVANSI LYAVSQPDDV DVSEIIIRPT ASPY
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