| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4556 |
|---|
| Symbol | |
|---|
| ID | 8015311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 4683775 |
|---|
| End bp | 4684836 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644827133 |
|---|
| Product | Succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_002978333 |
|---|
| Protein GI | 241207237 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00523769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTTT CAGAGATCAT CATCCCTGGA GATACGCCGG GAACGGAGTG GCGGTTGCCG
GTGCTGCGCT TTAAAGGCCA CGATCCGAAG GCGCCGAAGG CCTATATCCA GGCGGCACTG
CATGCCGGCG AGCTGCCGGG AACGGTGCTG CTGCATTTCC TCTGCGAAAG GCTGCGGCAG
GCGGAAAGCC AAGGTGGGAT CGCCGGCGAC ATCACCATCG TGCCGCAGGC CAATCCGATC
GGTGCGGCGC AATCGCATTT CGGCGAGCTG CAGGGCCGTT TCGACCTGGG CTCACGCACC
AATTTCAACC GGGATTTTCC GCTGATCTCG ATTGTCGATC GCACCACGCT GACCGAAGAT
CTCGATGATT ACCCGGCTAC CGACAGATTG AAGAGGCAGC TGCTGCATAT GGCGCTTGGC
GCCGATCTCG TGCTCGACCT GCATTGCGAC GACGAATCCC TGCAATATGC CTATATCGAC
GAGGCCTTCT GGCCGGAGGC CGCCGATCTT GCCGCTTCAC TCGGCATGGA GGCCGTGCTG
CTTTCGGATG GCGAAAGCTC GGCCTTCGAG GAGGCCGTCG GCTTTGCATG GAAATATGAG
GTTCCCGGCG AACGCCGGCC CCGTCTGCCC GGCAAACTCT CCGTCACCGT CGAGCTGCGC
GGCAAACGCG ACGTCGATCC GGTGCTGGCG AAAAAGGATG CGGATGGGCT CTGGCACTTC
CTCGCGGCAC GGGGGACCGT TGGCGACGAA AAGCCCGCGG CAATGCCATT TTCCGGTCCG
GCCGTGCCGC TCGACAATGT CGAGATCATC CGCACGCCAG AAGGCGGAGC CGTGCTCTTC
CATCGCGACA TCGGCGAGAG GGTTGCCGAA GGCGACCGCC TAGTGACGAT CGTCACTAGG
CCGGGGCAGC CGGGCGGCAG CATCGAGCTC ACCGCGCCGC AGGACGGGCT GATCCTGACC
CGAACCTCCG ACAGGCTGGT GCGGCGGCGC GGCGACCTGA TGAAGATCGC CTGTGACGAA
CCCAGCAAGG CTTCCCGCAA GGCCGGCACG CTGGAGAATT GA
|
|---|
| Protein sequence | MDVSEIIIPG DTPGTEWRLP VLRFKGHDPK APKAYIQAAL HAGELPGTVL LHFLCERLRQ
AESQGGIAGD ITIVPQANPI GAAQSHFGEL QGRFDLGSRT NFNRDFPLIS IVDRTTLTED
LDDYPATDRL KRQLLHMALG ADLVLDLHCD DESLQYAYID EAFWPEAADL AASLGMEAVL
LSDGESSAFE EAVGFAWKYE VPGERRPRLP GKLSVTVELR GKRDVDPVLA KKDADGLWHF
LAARGTVGDE KPAAMPFSGP AVPLDNVEII RTPEGGAVLF HRDIGERVAE GDRLVTIVTR
PGQPGGSIEL TAPQDGLILT RTSDRLVRRR GDLMKIACDE PSKASRKAGT LEN
|
|---|
| |