Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4547 |
Symbol | |
ID | 8015303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4674399 |
End bp | 4676267 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644827124 |
Product | hypothetical protein |
Protein accession | YP_002978324 |
Protein GI | 241207228 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.582266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTG TGCAGCCGAT CCCCCACGCA TCCTCCGCGA TCGACGCTCC CAGGGGCGGG GTGCCCGCTC CCAGGGGCGG GCTGCGCGAC CTGCTGACGC GTCTCTGGCC AACCGTCATC GCCTATAGCG TCATCCTTGC TGCGGCCATC CTCATCACCA AGCTTTCCGG CGCCACCGAT TACGTCGGCC CCGACAATGA TGACGGAATG CGTCTCGTCG AAGCTCGCGA TTTTCTGGCC GGGCAGGGTT GGTTCGATCT GATGCAATAC CGTCTCGGCC TCGATGGCGG TACGCTGATG CATTGGTCGC GGCTGATCGA TCTGCCGATC GCCTCGCTGA TCTGGTTCTT CGGCCTGTTT GCGCCCCGCG AGACGGCCGA AGCGCTGGCG CTCGCTGTCT GGCCGGTATC GCTCATCCTG CCCGCCATGC TCGCCATGGC GGTTGCCGGC CGGCGCATCG GCGGGGTTGC CGCCATGCAT ATCAGTCTCG GCTTGACCGG TCTTGCAATC TACACCGGAA ACCGTTTCGC GCCTGGCGCC ATCGATCACC ACAATGCGCA GCTGGGGCTG GTCGCGACGA TGATCGCGAT GCTTCTGGAT CCAGAGCGTC GAGCCTGGAG CTATGCGGTT GCCGGCGTCG CGGCAGCCGT TGCCATCGCC ATCGGCGCCG AGACGACCCC CTTCGTCGCC GCCGTCTGCC TGACCATTGC CCTGCTCTGG GCATGGGAAG GCGAAGATTT CGCCGCCGCC GCCAAGGCCT TCGGGCTGGC GCTGGCGATT GCGATCAGCA TCCTCTTCTT TGCAACGGTG CCGCCCCGGC TTTATTCGAC GGTCACCTGC GACAATCTCT CGCTCGGCTA TTACAGCCTG GCGGCGATCG GCGGCGGGTT GCTTTTGTTC TCGGCGGTTT TTGCCAGCCA CCTGCGCCGG CCCTTGCGCT TTGCCGCACT CGCCGTCGTC GGCGCCGGCG TTCTCGGTTC GGCGATCGTG ATCGCACCGC AATGCCTGAG CGATCCGCTG GCCGGTCTCG ACCCGATGCT GGTCGAACTC TGGCTGAGAA ATGTTTCGGA AGCGCAGTCG ATTTTCGCTC TCGGACGCAC CGATCCCTTC TCGATCGGTG GCTTCTATGC GGCCGGCCTG TTCGGCATCG CCGTCTGCAT CTTCCGTGTC TTTCAGCGTG ACCGCATGCA AATCCACCTG GTCTTGCTCT TCCTGCTGAT GACGAGCTGG GCAATCGCGC TGGTCCAGGT GCGCGGTTCG ACGTTCTCGA ACCTGATCTC CATCCTGCCG CTTGCCCTGT TGATTATCGA TGTCCGCCGC ATCTCCAACG GCGACGGCGA AAATGTCGCC GCCGCCTTCG TCTACATCGT CACCGTGCTC GCCAGTGCTC CGGCCGCCTG GGCGGTCGGC GGCGGGTTTA TCTCGCTGCA GATGGAGAAT GCTGCGCAGA AGAAGGCGGC AGAGCCGGCA AAGAAGATTT CCTGCGCATC GCAAGCGGCG CTGGCGCCGC TCGCCGGGCT ACCGGCCGGA CTGGTCTCCG CGCCGTCGGA AATGGGCGTG CCGATCCTCC GCTTCACCGC GAACCGGGTT CTCTCCGCGC CCTATCATCG CAATCAGGGC GGCATGCTGA CGGAACTGCA TATCGATATG GCGGAGCCGC AGGAGGCGGA GGCCTTTTTG AAAGGGACCG GCGTAACGGT GCTTGCCTTC TGCCCCGGCG ACCTACAGAC CCGCGAGATC GCCAAACTGA AGCCGGATGG GCTCTATGCT GAGCTCGGCA AGGGCAATAT CCCGCCCTAT CTGGAACCGC TTCCGAAGGC AGCGGACGTG GGCGTTCAGT TCTTTCGCTA TCGGCCGGCG ATGAACTGA
|
Protein sequence | MNAVQPIPHA SSAIDAPRGG VPAPRGGLRD LLTRLWPTVI AYSVILAAAI LITKLSGATD YVGPDNDDGM RLVEARDFLA GQGWFDLMQY RLGLDGGTLM HWSRLIDLPI ASLIWFFGLF APRETAEALA LAVWPVSLIL PAMLAMAVAG RRIGGVAAMH ISLGLTGLAI YTGNRFAPGA IDHHNAQLGL VATMIAMLLD PERRAWSYAV AGVAAAVAIA IGAETTPFVA AVCLTIALLW AWEGEDFAAA AKAFGLALAI AISILFFATV PPRLYSTVTC DNLSLGYYSL AAIGGGLLLF SAVFASHLRR PLRFAALAVV GAGVLGSAIV IAPQCLSDPL AGLDPMLVEL WLRNVSEAQS IFALGRTDPF SIGGFYAAGL FGIAVCIFRV FQRDRMQIHL VLLFLLMTSW AIALVQVRGS TFSNLISILP LALLIIDVRR ISNGDGENVA AAFVYIVTVL ASAPAAWAVG GGFISLQMEN AAQKKAAEPA KKISCASQAA LAPLAGLPAG LVSAPSEMGV PILRFTANRV LSAPYHRNQG GMLTELHIDM AEPQEAEAFL KGTGVTVLAF CPGDLQTREI AKLKPDGLYA ELGKGNIPPY LEPLPKAADV GVQFFRYRPA MN
|
| |