Gene Rleg_4530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4530 
Symbol 
ID8015288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4659210 
End bp4659809 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content63% 
IMG OID644827107 
Producttransglutaminase family protein cysteine peptidase BTLCP 
Protein accessionYP_002978307 
Protein GI241207211 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.671161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.129757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATCA AGGGTATCTT TGTGGCCATG ATGGCCGTGT TTGCGATGGC GACGGCCGCC 
ATACCGGCCC CAAGCAGAAA TGCTTCAATG GTAACGGGCA ATGCCACCTC ACAGCCGATC
GGCCACTACG ATTTCTGTCA GATCCACCGC AGTGAATGCG GCGCAAACCG CAACGCAGGC
CCGGTCGCCA TGAACCCGGG GAAGTGGTCG CTCGTGCGTT CGGTCAACGC CACGGTCAAT
CGCACGATCA CGCCGATGAC CGACAAGGAA ATCTACGGCA AGGATGAGGT CTGGGCCTAT
CCGACCACCG CCGGCGACTG CGAAGATTTC GCGCTCTTGA AGCGCCGCAT GCTGATCCAG
CGCGGCTTTT CGGCTGCCGA CCTGCTGATG ACCGTCGTGC GCAAGCCGGA CGGCGAAGGC
CATGCCGTGC TGACGCTGCG CACCGCCGAG GGCGATTTCG TGCTCGACAA CCTCGCTTCC
GACGTCAAGC CGTGGTTTGG GACGCCCTAT TCCTTCGTCA AGCGCCAGTC GAGCTACAAT
GCCGGCCGCT GGGTCACCAT CGAGAACGGC CGCGACGTCC TGGTCGGCGC GCTGCGGTAA
 
Protein sequence
MRIKGIFVAM MAVFAMATAA IPAPSRNASM VTGNATSQPI GHYDFCQIHR SECGANRNAG 
PVAMNPGKWS LVRSVNATVN RTITPMTDKE IYGKDEVWAY PTTAGDCEDF ALLKRRMLIQ
RGFSAADLLM TVVRKPDGEG HAVLTLRTAE GDFVLDNLAS DVKPWFGTPY SFVKRQSSYN
AGRWVTIENG RDVLVGALR