Gene Rleg_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4479 
Symbol 
ID8015242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4610528 
End bp4612003 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content62% 
IMG OID644827055 
Producttype II secretion system protein E 
Protein accessionYP_002978256 
Protein GI241207160 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAA AACGCGGAAA TGAGGGTTCC GGAAAGGTCG GGGGGGCGAT TGCTCCTCCG 
CCGCCGGCTC CGGCCGCCGC CCCTGCGGCC TCTTCCCCCT CCATTCTGGT CGAACCCTCG
CGCGAGTCCG CACGCCAGCA GGTGACGCCG CCGCCGATGC AGACGCCGCA GCGCAAGCGC
CCGGCCCGCA CCGATGAATA TTACGACACC AAGGCGCAGG TCTTTTCCGC GCTGATCGAC
ACGATCGATC TCTCGCAACT TTCCAAGCTC GACGGCGAAA GCGCCCGCGA GGAAATCCGC
GACATCGTCA ACGACATCAT CACCATCAAG AACTTTGCGA TGTCGATCTC CGAGCAGGAA
GAACTGCTCG AGGATATCTG CAACGACGTC CTCGGCTACG GCCCGCTGGA GCCGTTGCTG
GCGCGCGACG ACATCGCCGA CATCATGGTC AACGGCGCCG GTCAGACGTT CATCGAAGTC
GGCGGCAAGA CGATCGAATC GGAAATACGC TTCCGCGACA ATGCACAGCT TCTCTCGATC
TGTCAGCGCA TCGTCAGCCA GGTCGGCCGC CGCGTCGACG AATCGAGCCC GATCTGCGAC
GCCCGCCTGC CGGATGGCTC GCGCGTCAAC GTCATCGCGC CGCCGCTGTC GATCGACGGG
CCGGCGCTCA CCATCCGCAA GTTCAAGAAG GACAAGCTGA CCCTCGATCA GCTCGTCCGT
TTCGGCGCGA TCACGCCGGA AGGTGCAACC GTGCTGCAGA TCATCGGGCG CGTGCGCTGC
AATGTCGTCA TTTCAGGCGG CACCGGCTCG GGTAAAACCA CGCTTCTGAA CTGCCTCACC
AACTATATCG ACAGGGACGA ACGCGTCATC ACCTGCGAGG ATACGGCCGA ACTGCAACTG
CAGCAGCCGC ATGTCGTGCG TCTCGAAACG CGCCCGCCGA ATATCGAAGG CGAGGGCGAG
ATCACCATGC GCGATCTCGT CAAGAACTGC CTGCGTATGC GTCCCGAGCG CATCATCGTC
GGCGAAGTGC GCGGACCTGA AGTTTTCGAC CTGCTGCAGG CGATGAACAC CGGTCACGAC
GGTTCGATGG GCACCATCCA CGCCAACACA CCGCGCGAAT GCCTGAGCCG TATTGAATCG
ATGATCGCCA TGGGGGGCTT TACCCTGCCG GCAAAGACGG TGCGCGAGAT CATTTCCAGC
TCGGTCGATG TCGTCATTCA GGCGGCACGC CTTCGCGACG GTTCGCGCCG CATCACCCAG
ATCACCGAGG TGATCGGCAT GGAAGGCGAC GTCATCATCA CCCAGGACTT GATGCGCTAC
GAGATCGATG GCGAGGATGC GAATGGCCGC CTGATCGGCC GGCACATGTC GACCGGCGTC
GGCAAGCCGC ATTTCTGGGA TCGCGCCCGC TACTTCAACG AGGAAAAGCG TCTTGCCGCC
GCCCTCGACG CGATGGAAGC GAAAACGAAG GAATAG
 
Protein sequence
MFGKRGNEGS GKVGGAIAPP PPAPAAAPAA SSPSILVEPS RESARQQVTP PPMQTPQRKR 
PARTDEYYDT KAQVFSALID TIDLSQLSKL DGESAREEIR DIVNDIITIK NFAMSISEQE
ELLEDICNDV LGYGPLEPLL ARDDIADIMV NGAGQTFIEV GGKTIESEIR FRDNAQLLSI
CQRIVSQVGR RVDESSPICD ARLPDGSRVN VIAPPLSIDG PALTIRKFKK DKLTLDQLVR
FGAITPEGAT VLQIIGRVRC NVVISGGTGS GKTTLLNCLT NYIDRDERVI TCEDTAELQL
QQPHVVRLET RPPNIEGEGE ITMRDLVKNC LRMRPERIIV GEVRGPEVFD LLQAMNTGHD
GSMGTIHANT PRECLSRIES MIAMGGFTLP AKTVREIISS SVDVVIQAAR LRDGSRRITQ
ITEVIGMEGD VIITQDLMRY EIDGEDANGR LIGRHMSTGV GKPHFWDRAR YFNEEKRLAA
ALDAMEAKTK E