| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4476 |
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| Symbol | |
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| ID | 8015239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 4606852 |
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| End bp | 4608351 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644827052 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002978253 |
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| Protein GI | 241207157 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.988373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATT CAACGCGGCG CGCCGGACCT CTCCTGACAG GTTGCCTTTC GCTGGCAATC
GGCGCCTCTG GTATGGTGCC GGCCTCTTTC GCCCCACTCT TCGGTGCAGG CGAAGCGCGC
GCCGATTCCG ATAGCCTGGT CCGGATCTCG CAGACCGGCT CCAATGCCCA TCGCCGGCTG
AAGCTCGGGC TCAACAAGGC CGTCGTTGTC GATCTGCCGG AGGATGCGCA TGATATCCTC
GTCTCCGATC CGACCATGGC TGATGCCGTG ACCCGCACCT CGCGGCGCAT CTACCTGTTC
GGCAAGAAGG TCGGCCAGAC GAATATCTTC GTCTTCGGCG CCGGTGGACA GGAGATCGTC
AATCTCGACA TCGAGATCGA GCGCGACGTC TCCGGCCTCG AAGTCAATCT CCGCCGCTTC
ATTCCCGACT CCAACATCAA CGTCGAAATC GTCTCCGACA ACATCGTGCT GACCGGCACC
GTGCGCACGC CGCAGGATGC CACACAGGCC GCCGATCTGG CACAGGTCTT CCTGAAGGGC
GGCGAGGCGA CGACCAGAAC CGAAACGGCA TCCGGCACCG GCGGCGACAG CTCTGTGGCG
CTTTTTGCCG AAGGTCGCCA GAGTTCGCAG GTCGTCAACC TGCTGCAGAT CGAGGGCGAG
GACCAGGTCA CCCTCAAGGT GACGATCGCC GAGGTCCGCC GCGAGGTGCT GAAGCAGCTC
GGCTTCGACA ATCTGGTTTC CAATTCTTCC GGCATGACGG TCGCTCAGCT CGGCAGTCCC
AGCGCCGACA GCGCCGCGTC GACGGTCGGT GGCGGTCTGG CGGCGCTCTT CAAGAGCTCG
ATCGGCAAAT ACGACATTTC GACCTACCTC AACGCGCTGG AACAGGCCAA GGTCGTCAAG
ACGCTCGCAG AACCGACGCT GACGGCGATA TCGGGCCAGG CCGCGACCTT CAATTCCGGT
GGCCAGCAGC TTTATTCGAC GACCGACAGC GACGGCAATG TCACCGTCGT ACCGTTTAAC
TACGGTATCA GCCTCGCCTT CAAACCGGTC GTGCTGTCAT CGGGCCGCAT CAGCCTGCAG
ATCAAGACCA ACGTCTCCGA ACCGGTGGCC GGCAGCGGCA ACGCCACCTA TCAGCGCCGC
TCGGCGGAAA CCTCGGTGGA GCTGCCTTCG GGCGGCTCGA TCGCGCTCGC CGGCCTTATC
CGCGACAATG TTTCCCAGAC GATGGGCGGC ACGCCCGGTG TCTCGAAGAT CCCGCTACTC
GGGACGCTCT TCCGCCAGAA GGGTTTCGAG CGTCAGGAAA CCGAGCTCGT CATCATCGCC
ACGCCCTATC TGGTGCGCCC GGTGGCGCGC AACCAGCTCA ACCGGCCGGA CGACAATTTC
AGCCCTGAGA ACGACGGTGC GACCTTCTTC CTCAACCGTG TCAACAAGGT CTATGGCCGC
CGCGAGGCGC CCGTTGCAGA CGCGCAGTTC CACGGCTCGA TCGGGTTCAT CTACAAATGA
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| Protein sequence | MGNSTRRAGP LLTGCLSLAI GASGMVPASF APLFGAGEAR ADSDSLVRIS QTGSNAHRRL
KLGLNKAVVV DLPEDAHDIL VSDPTMADAV TRTSRRIYLF GKKVGQTNIF VFGAGGQEIV
NLDIEIERDV SGLEVNLRRF IPDSNINVEI VSDNIVLTGT VRTPQDATQA ADLAQVFLKG
GEATTRTETA SGTGGDSSVA LFAEGRQSSQ VVNLLQIEGE DQVTLKVTIA EVRREVLKQL
GFDNLVSNSS GMTVAQLGSP SADSAASTVG GGLAALFKSS IGKYDISTYL NALEQAKVVK
TLAEPTLTAI SGQAATFNSG GQQLYSTTDS DGNVTVVPFN YGISLAFKPV VLSSGRISLQ
IKTNVSEPVA GSGNATYQRR SAETSVELPS GGSIALAGLI RDNVSQTMGG TPGVSKIPLL
GTLFRQKGFE RQETELVIIA TPYLVRPVAR NQLNRPDDNF SPENDGATFF LNRVNKVYGR
REAPVADAQF HGSIGFIYK
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