Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4475 |
Symbol | |
ID | 8015238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 4606026 |
End bp | 4606841 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644827051 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_002978252 |
Protein GI | 241207156 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.156663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGG CTCGCCTTAT AATCCTAGCT GTCGCCGTGG TGGCAGCCGG CCTCGCCGGC CTCCTGGCAA TGCAAATGGC GGGCAGCGGC GGTGTCGTTA CCCAGGTCCG CTCGGTCGTC GAGAAGGAAC CGACCGTCAA CATCCTCGTC TCGAGCGGCA ATCTGTCGGT CGGCGCAAGG CTGGATGACC AGGCGGTGCA TTGGATGGCC TGGCCGCAGG GCGGCGTCGT TCCCGGCCTC ATCACCGAAA CCGACAAGCC GGATGCAATC AAGGATCTGC AGGGCGCCGT CGTGCGTCTG CCGATCTTCG AAGGTGAACC GATCCGGCCG GAAAAGATCG CCGATTCCAG CAGCCGCATC CTCTCCTCGC TGTTGCCGGC CGGCAAGCGC GCCGTCGCGA CTGAGATATC GGTGGCAACG GGCGCCGGCG GTTTCATCCT GCCGAATGAT CGCGTCGACG TCATCATGGT CCGCAAGGGC GCGGAGGCCG ACAAGCTCAT CACCGAAACC GTGCTGAGCA ATGTCCGCGT CCTCGCCATC GACCAGCAGA TCCAGGAAAA GGACGACGGC TCGAAATCGG TGGTCGGCAC GACCGCGACG CTCGAGCTTA CGCCCGATCA AACGAAGGTT CTTGCCGTCG CCCAGCAGAT GGCGGACCGG CTGTCGCTCG CGCTGCGTTC GGTCGCCGAT GCGCAGGAGC AGGATACCAG CGCCGCCGAC TATCTGCTGA GCGGCGACAA CGGCAGTGCG ATCATCCAGG TCATCAAATC GGGCGCCATC GTCACGGATG CGGGCGCCGC GCCGAAGGCG GAGTAA
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Protein sequence | MKPARLIILA VAVVAAGLAG LLAMQMAGSG GVVTQVRSVV EKEPTVNILV SSGNLSVGAR LDDQAVHWMA WPQGGVVPGL ITETDKPDAI KDLQGAVVRL PIFEGEPIRP EKIADSSSRI LSSLLPAGKR AVATEISVAT GAGGFILPND RVDVIMVRKG AEADKLITET VLSNVRVLAI DQQIQEKDDG SKSVVGTTAT LELTPDQTKV LAVAQQMADR LSLALRSVAD AQEQDTSAAD YLLSGDNGSA IIQVIKSGAI VTDAGAAPKA E
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