Gene Rleg_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4458 
Symbol 
ID8015224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4591107 
End bp4592099 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content61% 
IMG OID644827034 
Productbasic membrane lipoprotein 
Protein accessionYP_002978235 
Protein GI241207139 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.954654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CCCTTCTCAC TCTCTTTGCC GTGGCTGCCA TGTCGACGAC GGCGCTTGCT 
GCCGACGTCA AGCCGGCGCT GGTTTACGGC ACCGGCGGGA AGTTCGATAA GTCCTTCAAC
GAGGCGGCCT ATAACGGCGC CGAGAAGTTC AAGGCCGAGA CCGGCATTGC CTATCGCGAC
TTCGAGCCGA CGGGCGACAC CCAGGGCGAA CAGGCCATCC GCAACTTCGC CAGCCGCGGT
TTCAATCCGG TGGTTGCCGT TTCCTTTGCC TGGACCTCGG CCATCGAGAA GGTTGCAGCC
GAATTCCCCG ATACCAAGTT CATCATCGTT GACTCCGTCG TCGACAAGCC GAACGTCCGC
TCGGTTGTCT ACAAGGAAGA AGAAGGCTCC TACCTCGTCG GCGTTCTCGC CGGCATGGCG
TCGAAGTCGG GCAAGGTCGG CTTCGTCGGC GGCATGGATA TTCCGCTGAT CCGCAAGTTC
GAATGTGGCT ACGAGCAGGG CGCACGTTCC GTCAAGGCCG ATATCGAGGT CTTCCAGAAC
ATGACCGGCA CCACGGGCGC TGCCTGGAAT GACCCGGTCC GCGGCGGCGA GCTCACCAAG
AACCAGATCG ACCAGGGCGC CGACGTCGTT TATGCGGCAG CCGGTGCCAC CGGTCTCGGC
GTTCTGCAGA CGGCTGCCGA CAACAAGAAG CTGTCGATCG GCGTCGACTC CAACCAGAAC
TATCTGCATC CGGGCTCGGT CCTGACCTCG ATGGTCAAGC GCGTCGACCT CGCCGTCTAC
AATGCCTACA ACGACACCAA GAACGACAAG TTCACCGGTG GCGTCCAGGC GCTCGGCGTC
AAGGAAGACG GTGTCGGCGC TGCGATCGAC GAGCATAACA AATCGCTGAT CACGCCGGAA
ATGCAGGCTG CTGTCGACAA GGCCAAGGCC GACATCATCG CGGGAACCGT CAAGGTTCAC
GATTACACCT CGGACAGCGC TTGCCCGAAG TGA
 
Protein sequence
MKKSLLTLFA VAAMSTTALA ADVKPALVYG TGGKFDKSFN EAAYNGAEKF KAETGIAYRD 
FEPTGDTQGE QAIRNFASRG FNPVVAVSFA WTSAIEKVAA EFPDTKFIIV DSVVDKPNVR
SVVYKEEEGS YLVGVLAGMA SKSGKVGFVG GMDIPLIRKF ECGYEQGARS VKADIEVFQN
MTGTTGAAWN DPVRGGELTK NQIDQGADVV YAAAGATGLG VLQTAADNKK LSIGVDSNQN
YLHPGSVLTS MVKRVDLAVY NAYNDTKNDK FTGGVQALGV KEDGVGAAID EHNKSLITPE
MQAAVDKAKA DIIAGTVKVH DYTSDSACPK