Gene Rleg_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4447 
Symbol 
ID8015213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4581081 
End bp4582169 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID644827022 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978224 
Protein GI241207128 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.654672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.825965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCT ATATCCTTCG CCGCCTGCTT CTGATGATCC CGACCATCGT CGGCATCATG 
GCGATTTCCT TCATCGTCAT CCAGTTCGCG CCCGGCGGCC CCGTCGAGCA GGTGATCGCC
CAATTGACCG GTCAGGCCGA CAGTGCCGAC CAGCGCCTGT CTGGCGGTGG CGATCTTCTC
AGCGGCGGCG GCAGCGATGA AGGCTCGAAA TATCGCGGTG CCCAGGGGCT TGACCCGGAA
CTGATCGCCA AGCTCGAAAA GCAGTTCGGC TTCGACAAGC CGCCGCTGAC CCGTTTTGGC
GAGATGATGT GGAATTACAT CCGCTTCGAT TTCGGCGAGA GTTTCTTCCG CAACACCTCC
GTGCTCGAAC TCGTTAAAGA AAAGCTGCCG GTGTCGATCT CGCTCGGCAT CTGGATCCTG
ATCTTCTCCT ATGCCATTTC CATCCCGCTC GGCATCCGCA AGGCGGTCAA GGACGGATCG
ACCTTCGACG TCTGGACGTC AGGCGTCATC GTCGTCGGCT ATGCCGTCCC GAGCTTCCTG
TTCGGCATTC TCCTGATCGT GCTCTTCGCC GGTGGCTCCT TCTACGACTG GTTTCCGTTG
CGTGGCCTGG TCTCCGACAA TTTCGACCAG CTGGCCTGGT GGCAGAAGCC GCTCGATTAT
TTCTGGCACC TCACTCTGCC GCTGATTTCG CTTTCCCTGT CCGCCTTTGC GACGACGACG
CTTTTGACCA AGAATTCCTT CATCGAGGAG ATCAAGAAGC AATATGTCGT CACCGCCCGC
GCCAAGGGCC TGAACCAGCG GCAGGTGCTC TATGGCCATG TCTTCCGTAA CGCCATGCTG
ATCATCATTG CCGGTTTTCC CGGCGCCTTC ATTTCCGCTT TCTTCACCGG CTCGCTGCTG
ATCGAAAACA TCTTCTCGCT CGATGGCCTC GGCCGTCTCG GCTATCTCTC GGTCATCAAC
CGGGATTATC CGATCGTCTT CGCCACGCTC TACATCTTCT CGCTGCTCGG CCTCGTTGTC
AGCCTGGTTT CCGACCTGAT CTACACCTGG ATCGATCCGC GCATCGATTT CGAGCGGAGG
GATGTCTGA
 
Protein sequence
MGAYILRRLL LMIPTIVGIM AISFIVIQFA PGGPVEQVIA QLTGQADSAD QRLSGGGDLL 
SGGGSDEGSK YRGAQGLDPE LIAKLEKQFG FDKPPLTRFG EMMWNYIRFD FGESFFRNTS
VLELVKEKLP VSISLGIWIL IFSYAISIPL GIRKAVKDGS TFDVWTSGVI VVGYAVPSFL
FGILLIVLFA GGSFYDWFPL RGLVSDNFDQ LAWWQKPLDY FWHLTLPLIS LSLSAFATTT
LLTKNSFIEE IKKQYVVTAR AKGLNQRQVL YGHVFRNAML IIIAGFPGAF ISAFFTGSLL
IENIFSLDGL GRLGYLSVIN RDYPIVFATL YIFSLLGLVV SLVSDLIYTW IDPRIDFERR
DV