Gene Rleg_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4442 
Symbol 
ID8015209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4574268 
End bp4576055 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content63% 
IMG OID644827017 
ProductABC transporter related 
Protein accessionYP_002978219 
Protein GI241207123 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.601236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAGCGG CGGAAAGCAG AACGCAGAGC GTCAGCAGCG ATACCGTAAC CGGTATCCTG 
AAGCGCATCA TCGCTGAAAA CGGCCGCGAC CATCTGTGGG GCTATGTCTT TGCGATCGCC
TGCCTCATCG TGGTGGCGCT TTCGACGGCG TTCACCGCCT GGATCATGCG GGCGATCATC
GACGAGGCCT TCGCCAATCG GCGCGCCGAC GTCGTCTGGA TCATCTGTCT TTCGATCTTC
ATAGCCTTCG TGCTGCGCGG TTTTGCGAGC TACGGTCAGG CGGTGGCGCT TTCCAAGGTC
GGCAACGATA TCGTCGCCCG CTACCAGCGC CGGCTCTATG CGCATCTGAT GACGCTTTCG
GTCGGCTTCT TCAGCGAGGC GCGCTCTGCC CATATCGCCG CGCAGGTGAG CCAAAACGTC
AGCGGCATCC GTGACGTGCT CAACCTGACG ATCACCTCGA CAGTGCGCGA CCTGCTGACC
TTTGTTTCGC TGCTCGCCGT GATGATCCTC CAGGATCCGC TGCTCAGCCT TGCCGTGTTC
ATCATGGCCC CACCGCTGCT CTATGCGCTG CGTTATGTTT CCAAGCGGCT GCGCTCGGCC
ACCCGCGAGG CCGTACATCT GAACAGCCAC GTTCTCGGCG CCATGCAGGA GACGATCCAG
GGTATCGCCA TCGTGAAAGC CTTCACGATG GAAGAAGAGC TGGAACGGAA GGTCAACAAA
CTCATCAAGG GCGCCGAAAG CCGGGCGAAC CGGATTGCCC GGCTTTCCGA ACGCACTTCT
CCTCTGACGG AAAGTTTCGC GGGCTTTGCC GTCGCCAGCG TGCTTGCCTA TGCCGCCTAC
CGCTCGATCT ATAACAATGT GCCGCCAGGC GCCTTCTTCT CCTTCGTCAC GGCGCTGCTG
CTTGCCTATG ATCCGGCCCG CCGGCTTGCC CGCCTGCAGG TGCAGATGGA GCGCGCCGTC
GTCAATGCGC GGATGATCTA CGAATTGCTC GACATGGAAC CGCGCCAGCG CGACCTGCCG
GATGCCCGGC CGCTGACGGT GACGCAGGCA AGGATTGAAT TCCGCAATGT GTCATTCGCC
TACGGCAATG AGAGCGTGCT CAGCGGCGTC AGTTTCATCG CCGAGGGCGG TGCGACCACC
GCACTTGTCG GTCCCTCCGG CGCCGGCAAA TCCACCGTCA TCAGCCTCAT TCCGCGCTTC
TACGATCCGC GCGAGGGCGA AATCCTGATC GACGGACAGG ACATCGCCCA CATCACCAAG
AAGTCGCTGC GCCAGCAGCT CGCCTATGTC TCGCAACAGC CCTATCTTTT CGAGGGCACG
ATCCGCGACA ATATCCGCTA TGGCCGGCCG GAAGCGACCG ATGCCGAGGT GGAAGAGGCG
GCACGCCTTG CCTATGCGCA TGACTTCATC TCGGCACAGC CGCAGGGTTA CGAGACACCG
GTCGGCGAAA ACGGCGTGAC GCTTTCGGGC GGCCAGCGCC AGCGGCTGTC GATCGCACGC
GCCCTGGTGC GCAATGCGCC GATCCTGCTT CTCGACGAGG CGACCTCGGC CCTCGACACC
GAATCCGAAG CAGCCGTGCA GAAGGCGCTC GACGAAGCGA TGAGCGGACG CACCGTCGTC
GTCATCGCCC ACCGGCTTTC GACCGTGGTG CGGGCCGACA AGATCGTCGT CATGCAGCAG
GGCCGCGTCG TCGAGGAAGG CAATCACGAG ACGCTTGCGA AGGTCAGCGA CGGTCTTTAC
GCTCGCCTCA ACAACCTGCA GAGGCCTTCG GCCTCCGATT CAAACTGA
 
Protein sequence
MEAAESRTQS VSSDTVTGIL KRIIAENGRD HLWGYVFAIA CLIVVALSTA FTAWIMRAII 
DEAFANRRAD VVWIICLSIF IAFVLRGFAS YGQAVALSKV GNDIVARYQR RLYAHLMTLS
VGFFSEARSA HIAAQVSQNV SGIRDVLNLT ITSTVRDLLT FVSLLAVMIL QDPLLSLAVF
IMAPPLLYAL RYVSKRLRSA TREAVHLNSH VLGAMQETIQ GIAIVKAFTM EEELERKVNK
LIKGAESRAN RIARLSERTS PLTESFAGFA VASVLAYAAY RSIYNNVPPG AFFSFVTALL
LAYDPARRLA RLQVQMERAV VNARMIYELL DMEPRQRDLP DARPLTVTQA RIEFRNVSFA
YGNESVLSGV SFIAEGGATT ALVGPSGAGK STVISLIPRF YDPREGEILI DGQDIAHITK
KSLRQQLAYV SQQPYLFEGT IRDNIRYGRP EATDAEVEEA ARLAYAHDFI SAQPQGYETP
VGENGVTLSG GQRQRLSIAR ALVRNAPILL LDEATSALDT ESEAAVQKAL DEAMSGRTVV
VIAHRLSTVV RADKIVVMQQ GRVVEEGNHE TLAKVSDGLY ARLNNLQRPS ASDSN