| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4421 |
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| Symbol | |
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| ID | 8015191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 4550570 |
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| End bp | 4552909 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826996 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) |
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| Protein accession | YP_002978198 |
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| Protein GI | 241207102 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.920702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCGG TCATTACATG TATTCGGGAC AACCACGATT GGCGGCTGGT GCTTGCGGCG
GCCGCCGTCT GCCTGGTCGG CGCTATGGCG GCTATGCTGC TGCTTTCCCG TGCCCAGGAA
TGCGATGCCG GGCGGCGCAA GCTCTGGATC GGCGCCTCGG CCTTCGCTTT TGGCACCGGC
GTATGGGCAA CGCACTTCAT CGCGATGCTG GCCTATGACG GCGGCATGCC GATCGGCTAC
CAACTGGGCC TGACGACGCT TTCTTTCCTC CTGTCGGTTG TCGGTTCGTG GGCGGCGATC
CTCGTCGCTT CGGAAAGCCG CGGCAGGTTT TCTCGTATCC GCGGCGGGGT CCTGATGGCG
CTCGGCATCG CCTCCATGCA CCTGACCGGC ATGCAGGCGA TCGAAACGCA GGCGGTCATC
CTTTATGATC CCTTCATGAC GCTGAGTGCG GTTCTCGCAG GAGCGCTGTT GTCGAGCGCC
GCCTTCCACA CCTTTTTCCA ATTGAAGGGA CTGCGGCGGC TCCTCGCCTC GTCAATCACT
TTCGTCCTTG CGATCTGCGC GCTCCATTTC ATCTCGATGG CTAGCATCAC GCTCGTGCCG
GATCTCGGGA AAGAGGTTCC GGCAACGGTG CTCGACGCCA GCCTGCTTGC TGCGATCGTC
GTGGTGGCGG CAACGATGCT CATTCTGATT GCGCTCGCCG TGGTCTTTGT CGAAAGCCAC
CTGACGGATC TGAGGGGGCT CGCGAATGCC TCGCAGGAAG GGCTGCTGAT TCTGCGGGAA
GGCCGGATCA TCGATGCCAA TGAACGCTTC CAGGGGCTTT CCGGCTGGAA GCTTGCCGGT
CTTGCCGGTA AGGCGCCCTC GGCTGTTTTG ACCGCTGTTC AGGGGACTGG GCAGAACAGA
TCCAGCGAGA CGCTGCTCAA CACCAGGAAC GGCAGGGAGA TCGCCGTCGA AGTGACCACG
AGCAGGATCG TCTATCGCGG GCATAATTGT GAGGTGCTGG CGGTGCGTGA TCTCACCGAG
CGCAGGCAGG CCGAGGAGAT GATCGAGCAT CTCGCCCACC ACGACGTGCT CACCGATTTG
CCGAACAGGT CGCTGTTCGA TACCCGCATC CGGCAGGCAC TGCAGATGGC CGAACGAAAG
AACAGCGAGG TTGCCCTCTT CTATCTCGAC CTCGATCGCT TCAAGGCCGT CAACGATATC
TTCGGTCATG CTGAAGGCGA CCGCATTCTC CGTAAGGTCG CCTCGATCCT GCGCCGCGTG
GCCGATGAGA GCGATACGAT CGCCCGCCTC GGCGGCGATG AATTCGCCAT CATTCAGCTC
GCCGGGCAGC AGCCGGCGGC GGCGCAAAAG CTTGCGGCTG ATATCCTCGG CGAATTCGCC
GCCGAGATGG ACACGGCACG TGACCCGACC GCCGTCGGCG TCAGTGTCGG CATCGCACTC
TATCCCGCGG ATGGCATGGC TGCTGAAGAA CTCTGCAACA ATGCCGATAC TGCACTCTAC
CGCGTCAAGC ATGACGGTCG CGGCAAGGTC TGTTTCTTCG ACGCGGAAAT GGATAAGGCG
GCACGGAACC GCCGCCAGAT CGAAAGCGAA CTGCGCCATG CGATCGTCCG CAACCAGATC
CATGTCAGCT ATCAGCCGAT CCTCGATGCG CTGAGCGGCG AGATCGGTGG CTACGAGGCC
CTGATGCGCT GGAACCGGCC AGGTCACGGC TTGACCGAGC CCGATATCTT CATCCCGATC
GCCGAGGAAA GCGGCTCGAT CGTCCAACTC GGCGAATGGG TGTTGCAGCA GGCCTGCAGG
GAGGCTGTGC GCTGGCCGCT GCCGTTGATG ATCGCCGTCA ATCTCTCGCC GGTGCAATTC
ATGCTGCCGA ACCTCTGCGA GCGGATCGAG GCGATTCTCG CCGAAACCGG GCTTGCGCCC
AGCCGGCTGG AGCTCGAGAT CACCGAGGCG GCCCTCATTC GCGATCGCGA CCGGGTAATG
ACGACGCTGC TGCGGCTGCA CAAGCTCGGT GTGCACATCG TCATGGATGA TTTCGGCACC
GGTTTTTCCT CGCTTTCCAA CCTGCGTTCA TTCCCTTTCG ACAAGATCAA GGTCGACCGC
AGTTTCACCG GCGTGCTGGA ACATGATGCG GCGGCGCGCT CGATCGTGCG CGCCATCATC
GGCCTTGGTC ATAGCCTCGG CATGCCTGTC GTGACGGAGG GCGTGGAAAC CGAGATGCAG
CGCCGGATCG TCGTCGAGGA AGGCTGCACG CAAGTACAGG GCCTTTTACT CGGCAAGCCG
GATATCGAGC CGAGCATCAA GCTTGCCGCC CACGAAAACG TGCTGACCGC GCAGATCTAA
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| Protein sequence | MFSVITCIRD NHDWRLVLAA AAVCLVGAMA AMLLLSRAQE CDAGRRKLWI GASAFAFGTG
VWATHFIAML AYDGGMPIGY QLGLTTLSFL LSVVGSWAAI LVASESRGRF SRIRGGVLMA
LGIASMHLTG MQAIETQAVI LYDPFMTLSA VLAGALLSSA AFHTFFQLKG LRRLLASSIT
FVLAICALHF ISMASITLVP DLGKEVPATV LDASLLAAIV VVAATMLILI ALAVVFVESH
LTDLRGLANA SQEGLLILRE GRIIDANERF QGLSGWKLAG LAGKAPSAVL TAVQGTGQNR
SSETLLNTRN GREIAVEVTT SRIVYRGHNC EVLAVRDLTE RRQAEEMIEH LAHHDVLTDL
PNRSLFDTRI RQALQMAERK NSEVALFYLD LDRFKAVNDI FGHAEGDRIL RKVASILRRV
ADESDTIARL GGDEFAIIQL AGQQPAAAQK LAADILGEFA AEMDTARDPT AVGVSVGIAL
YPADGMAAEE LCNNADTALY RVKHDGRGKV CFFDAEMDKA ARNRRQIESE LRHAIVRNQI
HVSYQPILDA LSGEIGGYEA LMRWNRPGHG LTEPDIFIPI AEESGSIVQL GEWVLQQACR
EAVRWPLPLM IAVNLSPVQF MLPNLCERIE AILAETGLAP SRLELEITEA ALIRDRDRVM
TTLLRLHKLG VHIVMDDFGT GFSSLSNLRS FPFDKIKVDR SFTGVLEHDA AARSIVRAII
GLGHSLGMPV VTEGVETEMQ RRIVVEEGCT QVQGLLLGKP DIEPSIKLAA HENVLTAQI
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