Gene Rleg_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4417 
Symbol 
ID8015187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4544635 
End bp4546974 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content64% 
IMG OID644826992 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_002978194 
Protein GI241207098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.896917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA GAGGCAGATC AGGCGACAGA ATAGAACCCT CCTTCAGCGG CCGCCCGGCG 
CGCGACGATG ACGAATTCTC GCTCGATGCC GACGATCGCA TCGCCGGAGG CCGATCTCAG
CGCCGCGGCG GCTCGAAACC CCCGCCGCAA CGCGCCGCCC CCCGGCGGCG GCGCGAGCCG
CGGGAGCGTG AAGGCGGCGT TTTTTTCGGC TTCCTGCGCC GTGTGATCTA CTGGTGCGTC
GTGCTTTTCA TCTGGGCCGG CATCGGCGTT GCCGGGCTTG TGGTCTATTA TGGCTCGCGC
ATGCCGAGCG CCAGCACATG GGCAATCCCG GAGCGGCCGC CGAACGTCAA GATCACCGCC
GTCGACGGTA GCGTCATCGC CAATCGCGGT GCCACCGGCG GCGAGGCGCT GTCGCTCGAA
AACATGTCGC CCTATATTCC GGAAGCCGTC ATCGCCATCG AAGATCGGCG TTTCTATTCG
CATTTCGGCG TCGATCCGCT CGGCCTCGGC CGGGCTGTCG TGACCAATCT CACGGCTGGT
CACATGGTGC AGGGTGGCTC GACGCTGACG CAGCAGCTTG CCAAGAACCT CTTCCTCTCC
CCCGAGAGAA CGCTGGAACG CAAGGTGCAG GAAGTGCTGC TGTCGCTCTG GCTGGAGCAG
AAATACACCA AGGACCAGAT CCTTGCCATG TATCTCAACC GGGTGTTCTT CGGATCGAAC
GCCTATGGCG TCGAGGCCGC CTCGCGCCGG TACTTCAACA AATCGGCGCG TGACGTAAAC
CTCGGCGAGG CCGCGGTGCT GGCCGGCCTG CTCAAGGCGC CGTCGCGGCT TTCACCGGCC
CGCGATGCCG ATGCGGCGAA TGCCCGCGCC CAGCTCGTGC TCGCGGCGAT GCGCGAGCAG
GGTTTCATCA CCGATTCCGA GGTCAAGACG GCGATGTCGC AGACCCCGGC TTCGGCCAAG
AGCTACTGGT CGGGCGCCGG GCACTATGTC GCCGACATGG TGATGGACGA GCTGCCGGGT
CTGATCGGCG ACGTCAAGGA AGACGTCATC GTCGATACGA CCATCGACAA GTCGCTGGAA
AAGAAGGCCG AGCAATCGCT GGTCGACGTA CTGGACAAGG AGGGCGGCAA GCTCGACGCC
TCGCAGGCGG CCCTCGTCTC GATCGACGGC ACCGGCGCGA TCCGAGCGCT CGTCGGCGGC
AGGGATTATG CGACGAGCCA GTTCAACCGC GCCGTCAAGG CCAAACGCCA GCCGGGTTCC
TCGTTCAAGC CCTTCGTCTA TGCCGCAGCA CTCGAGAAGG GGCTGACGCC GTATTCGGTG
TTCAACGACG CGCCGATCCG GATCGGCGAC TGGACGCCCG AAAATTACGA AAAAAAATAC
AATGGCGAAG TGACGCTGGC GACCGCGCTT GCCAAATCGC TGAACACGGT GGCTGCGCAG
CTGGTGATGT ATGACGGGCC GGATCAGGTG ATCAAGCTTG CCCACCGGCT CGGCATCGAA
AGCGAGCTGC AGCCGAATGC CTCGATCGCG CTCGGCACGT CCGAAGTGTC GCTGATGGAA
CTCACCGCCT CCTATGCCGC CTTCATGAAC GGCGGCTACA AGGCGACGCC GCACGTCATC
CGCCGGGTGA CGACGGCCGA GGGCAAGGTT CTCTACGAAA ATACCTATGA CAGCCCGCCG
CGCGTGCTCT CCGAGCAGAT CGTCGCCCAG ATGGATACGA TGATGATGGG CGTCATCGAG
AGCGGCACCG GGAAAAGCGC CAAGATCCCC GGTTGGCAGG CGGCGGGAAA GACCGGCACG
ACGCAGAATT CGCGCGACGC GCTCTTCGTC GGTTTCACCA GCAACCTGAC CACGGGCGTC
TGGTTCGGCA ATGACGACGG CAAGCCGATG AAGAAGGTGA CCGGCGGCGG CTTGCCCGCC
AAGGCCTGGA AGGAATTCAT GATCGCCGCC CACAAGGGTC TTTCGCCGGC ACCTCTCTTC
GGCAACGGCC AGTTGATCGC CGATCCGAAC AATGGTCAGC CAATGGCTGA GGCACCGGGC
AATGGGCAGT TGGGCAGCGG GCAACCGATG ACGGCCGAAG CGCCGCCTTC GACGATCGGC
GGCATTATTT CCGGCGTCTT CGGCGGCGAC GACAATGCAA ACCGCTATCC GCAAGCGCCT
GCCCGGCAGC AAGGGGCAAG CTTCGGCAAT GGCGGCCCGG TTCCGCCCGC AGACATTGCC
GAAGGCGGGG GTCCGAACTA TGAGGGCATG GTTCCACCCG GCGATGTCGG GGGCGCGCAG
ACAACCTCTT CCGTCCAGCC GCGGCGCACG ACGCTGCTCG ATCTGATCAT GGGCCAGTGA
 
Protein sequence
MAGRGRSGDR IEPSFSGRPA RDDDEFSLDA DDRIAGGRSQ RRGGSKPPPQ RAAPRRRREP 
REREGGVFFG FLRRVIYWCV VLFIWAGIGV AGLVVYYGSR MPSASTWAIP ERPPNVKITA
VDGSVIANRG ATGGEALSLE NMSPYIPEAV IAIEDRRFYS HFGVDPLGLG RAVVTNLTAG
HMVQGGSTLT QQLAKNLFLS PERTLERKVQ EVLLSLWLEQ KYTKDQILAM YLNRVFFGSN
AYGVEAASRR YFNKSARDVN LGEAAVLAGL LKAPSRLSPA RDADAANARA QLVLAAMREQ
GFITDSEVKT AMSQTPASAK SYWSGAGHYV ADMVMDELPG LIGDVKEDVI VDTTIDKSLE
KKAEQSLVDV LDKEGGKLDA SQAALVSIDG TGAIRALVGG RDYATSQFNR AVKAKRQPGS
SFKPFVYAAA LEKGLTPYSV FNDAPIRIGD WTPENYEKKY NGEVTLATAL AKSLNTVAAQ
LVMYDGPDQV IKLAHRLGIE SELQPNASIA LGTSEVSLME LTASYAAFMN GGYKATPHVI
RRVTTAEGKV LYENTYDSPP RVLSEQIVAQ MDTMMMGVIE SGTGKSAKIP GWQAAGKTGT
TQNSRDALFV GFTSNLTTGV WFGNDDGKPM KKVTGGGLPA KAWKEFMIAA HKGLSPAPLF
GNGQLIADPN NGQPMAEAPG NGQLGSGQPM TAEAPPSTIG GIISGVFGGD DNANRYPQAP
ARQQGASFGN GGPVPPADIA EGGGPNYEGM VPPGDVGGAQ TTSSVQPRRT TLLDLIMGQ