Gene Rleg_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4393 
Symbol 
ID8015166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4522182 
End bp4523615 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content62% 
IMG OID644826968 
Productlytic murein transglycosylase 
Protein accessionYP_002978170 
Protein GI241207074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCACC ACACCCCCCT CTGCCCTGCC GGGCATCTCC CCCACAAGGG GGGAGATCAC 
AAGTGGCTTT GGTTTCCCGC TTCATTGTCA GCTTGCCGCG CAGAAACGTC GATTGTCGGC
GGAAACCTCC GCGCCCAGCC GATCTCCCCA CCTGTGGGGG AGATACCCGG CAGGGCAGAG
GGGGGTGTTC CACGGCGGCT GCGGATATTC GCACTCACAT TGGCGGCAGC TCTCCTGCCC
CTCTCCTGTT ACGCGGCCCC TTCGAAAGCC GATGTCGAGG CGCAGTTCGA GAAATGGGTG
CAGAGTGACC TCTGGCCGGA GGCGAAGGCG AACGGCATTT CGGAGAAGGT CTTTCAAGCC
GCTTTCTCCG GCATCACGTT GAACTGGAAC CTGCCCGATC TCGCCCCGCC CGGTTTCCCG
CCGCCGAAGG AGCAGAAGCA GACGCAGGCC GAATTTTCCT CGCCCGCTCC CTATTTCAAC
GAAGACCAGC TGAAGAAACT TGCCGCAACA GGTCGCGGCT TTGCCGCCCA ATACGGCTCG
ACGCTGAAGC GGATCGAAAA GACCTATGGC GTGCCGGGCT CGATCGTGCT GGCCATCTGG
GGCCGTGAGA CCGGCTTCGG TGCGGCGAAG ATCCCGAATT CGGCGATCGA GGTGCTGGCG
ACCAAGGCCT TCATGTCGAC GCGCAAGGAG ATGTTCCGCA CCGAGCTGGT GGCCGCACTC
CATATTCTCG ACGGCGGTGA CGTCACACCT GCTAATTTCA AGGGTTCGTG GGCGGGCGCA
CTCGGCCAGC CGCAATTCAT GCCGACCAGC TATCTGAAAT ATGCCGTGGA TTTCGATGGC
GACGGCCACC GCAATATCTG GACCTCGGTG CCCGATACGC TCGCCTCGAT CGCCAATTAC
CTGGTCAAGA AAGGTTGGCA GCGCGGCCGC GACTGGGGCT TCGAGGTGTC GATACCGGAG
GCGGTTTCCT GCGCGCAGGA AGGACCCGAT CTGGCAAAGC CGCTGTCGCA CTGGGCCTCG
CTCGGCATCG ACCGCATCTC CGGCAAGGGC TTTCCCTCCG GCGAGATGAA GGCTGAGGGC
ATGATGCTGG TTCCGGCCGG CCGCGACGGA CCGGAATTCA TCGTCACGCC GAATTTCTAC
ATCATCAAGG AATACAATAA TTCCGATCTC TACGCGCTCT ATATCGGCAA CCTCGCCGAC
CGGATCGCCC ATAATGACGG CGCCTTCCAG GGCAGATGGG GTGATGTCGG CAAGATGCTG
CGCTCGGATG TCACCGCCAT GCAGAAGGCG CTGGAACGGC AGGGCTATGA TGTCGGCGGT
TCCGACGGTC TGCCGGGCTA CAAGACCCGG CGTTCAATCG GCCAGTGGCA GGCAAAGAAC
GATATGAAGC CGACATGCTT TCCGGAGGCG ACGATGAAGG GCAAGCTGAA GTAA
 
Protein sequence
MLHHTPLCPA GHLPHKGGDH KWLWFPASLS ACRAETSIVG GNLRAQPISP PVGEIPGRAE 
GGVPRRLRIF ALTLAAALLP LSCYAAPSKA DVEAQFEKWV QSDLWPEAKA NGISEKVFQA
AFSGITLNWN LPDLAPPGFP PPKEQKQTQA EFSSPAPYFN EDQLKKLAAT GRGFAAQYGS
TLKRIEKTYG VPGSIVLAIW GRETGFGAAK IPNSAIEVLA TKAFMSTRKE MFRTELVAAL
HILDGGDVTP ANFKGSWAGA LGQPQFMPTS YLKYAVDFDG DGHRNIWTSV PDTLASIANY
LVKKGWQRGR DWGFEVSIPE AVSCAQEGPD LAKPLSHWAS LGIDRISGKG FPSGEMKAEG
MMLVPAGRDG PEFIVTPNFY IIKEYNNSDL YALYIGNLAD RIAHNDGAFQ GRWGDVGKML
RSDVTAMQKA LERQGYDVGG SDGLPGYKTR RSIGQWQAKN DMKPTCFPEA TMKGKLK