| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4360 |
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| Symbol | rpsA |
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| ID | 8015134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4487927 |
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| End bp | 4489630 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644826936 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002978139 |
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| Protein GI | 241207043 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.294177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00911055 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGTAG CTACCCCCTC CCGCGAGGAT TTCGCGGCTC TTCTCGAAGA GTCCTTTGCC
AAGAACGACC TGGCCGAAGG CTATGTCACC AAGGGCATCG TCACGGGCAT CGAGAAGGAC
GTCGCCGTTG TCGACGTCGG CCTGAAGGTT GAAGGCCGCA TCGCGCTGAA GGAATTCGGC
GCGCGCGCCA AGGACGGCCT GTTGAAGGTC GGCGATGAAG TCGAAGTTTA TGTCGAGCGC
ATCGAAAACG CGCTTGGCGA AGCCGTTCTG TCGCGCGAGA AGGCTCGCCG CGAAGAAAGC
TGGGTCAAGC TCGAAGCCAA GTTCGAAGCT GGCGAGCGCG TCGAAGGCGT GATCTTCAAC
CAGGTCAAGG GCGGCTTCAC GGTCGACCTC GACGGTGCGA TCGCCTTCCT GCCGCGTTCT
CAGGTCGATA TTCGTCCGAT CCGCGACGTG ACCCCGCTGA TGCACAACCC GCAGCCCTTC
GAAATCCTCA AGATGGACAA GCGCCGCGGC AACATCGTGG TTTCGCGCCG TACGGTTCTG
GAAGAATCCC GTGCCGAGCA GCGTTCTGAA ATCGTTCAGA ACCTCGAAGA AGGCCAGGTT
GTTGACGGCG TCGTCAAGAA CATCACCGAT TACGGTGCGT TCGTTGACCT CGGCGGCATC
GACGGCCTGC TGCACGTCAC CGACATGGCA TGGCGCCGTG TGAACCATCC GTCGGAAATC
CTGAACATCG GCCAGCAGGT CAAGGTTCAG ATCATCCGCA TCAACCAGGA AACCCACCGT
ATCTCGCTCG GCATGAAGCA GCTCGAGAGC GATCCGTGGG ATGGCATCCA GGCCAAGTAT
CCGGAAGGCA AGAAGATTTC CGGTACCGTC ACGAATATCA CCGATTACGG TGCATTCGTC
GAGCTGGAGC CGGGCATCGA AGGCCTGATC CACATCTCGG AAATGTCCTG GACCAAGAAG
AACGTTCACC CCGGCAAGAT CCTGTCCACG AGCCAGGAAG TCGAAGTCGT CGTTCTCGAA
GTCGACCCGT CCAAGCGCCG TATTTCGCTC GGCCTCAAGC AGACGCTGGA AAATCCGTGG
GCAGCATTTG CCCGCAGCCA TCCGGCCGGC ACTGAAGTCG AAGGCGAAGT CAAGAACAAG
ACCGAATTCG GCCTGTTCAT CGGTCTCGAC GGCGATGTCG ACGGCATGGT GCACCTCTCC
GACCTCGACT GGAACCGTCC GGGCGAACAG GTCATCGAGG AGTTCAACAA GGGTGACGTC
GTCAAGGCCG TCGTTCTCGA CGTCGATGTC GAGAAGGAAC GCATCTCGCT CGGCATCAAG
CAGCTCGGCA AGGATGCAGT CGGCGACGCC GCTGCTTCCG GCGACCTGCG CAAGAATGCA
GTCGTTTCCT GCGAAGTGAT CGCGGTCAAC GACGGCGGTG TCGAAGTGAA GCTCGTCAAC
CACGAGGACA TCACTTCCTT CATCCGCCGT GCCGACCTCG CCCGCGACCG CGACGAGCAG
CGCCCCGAGC GCTTCTCGGT CGGCCAGGTG TTCGACGCCC GCGTTACCAA CTTCTCCAAG
AAGGACCGCA AGATCATGCT GTCCATCAAG GCTCTGGAGA TTGCGGAAGA GAAGGAAGCC
GTTGCCCAGT TCGGTTCGTC CGACAGCGGC GCTTCGCTCG GCGACATCCT GGGCGCAGCC
CTGAAGAACC GCGGCGGCGA ATAA
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| Protein sequence | MSVATPSRED FAALLEESFA KNDLAEGYVT KGIVTGIEKD VAVVDVGLKV EGRIALKEFG
ARAKDGLLKV GDEVEVYVER IENALGEAVL SREKARREES WVKLEAKFEA GERVEGVIFN
QVKGGFTVDL DGAIAFLPRS QVDIRPIRDV TPLMHNPQPF EILKMDKRRG NIVVSRRTVL
EESRAEQRSE IVQNLEEGQV VDGVVKNITD YGAFVDLGGI DGLLHVTDMA WRRVNHPSEI
LNIGQQVKVQ IIRINQETHR ISLGMKQLES DPWDGIQAKY PEGKKISGTV TNITDYGAFV
ELEPGIEGLI HISEMSWTKK NVHPGKILST SQEVEVVVLE VDPSKRRISL GLKQTLENPW
AAFARSHPAG TEVEGEVKNK TEFGLFIGLD GDVDGMVHLS DLDWNRPGEQ VIEEFNKGDV
VKAVVLDVDV EKERISLGIK QLGKDAVGDA AASGDLRKNA VVSCEVIAVN DGGVEVKLVN
HEDITSFIRR ADLARDRDEQ RPERFSVGQV FDARVTNFSK KDRKIMLSIK ALEIAEEKEA
VAQFGSSDSG ASLGDILGAA LKNRGGE
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