Gene Rleg_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4358 
Symbol 
ID8015133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4485434 
End bp4486060 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID644826934 
Product3'-5' exonuclease 
Protein accessionYP_002978137 
Protein GI241207041 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00583903 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCGA CCATACGTTA TCACGAAGGC GATATTTCCG CGGCCGATGC CGCCCGCTAC 
ACCGGCGCGA TCGCGATCGA CACCGAAACG CTCGGTCTGG TGCCGCGCCG CGATCGGCTC
TGCGTCGTCC AGCTTTCGCC GGGTGACGGC ACCGCCGATA TCATCCGCAT CGCCGCCGGT
CAGAAAGAGG CGCGCAATCT CGTCGCCCTG CTTGAAGACC CCACCCATCA AAAGATCTTT
CATTACGGCC GCTTCGATAT TGCCGTGCTC TTCCATACCT TCGGCGTCAC CGCGACCCCG
GTGTTCTGCA CCAAGATCGC CTCGCGTCTG ATCCGGACCT ATACGGATCG CCACGGCCTC
AAGGACAATC TCAAGGAGAT GCTCGACGTC GACGTCTCCA AGGCGCAGCA ATCTTCCGAT
TGGGCGGCCG AGAGGCTGTC TCCGGCGCAG CTCGAATATG CCGCCTCCGA CGTGCTTTAT
CTGCATGCGT TGCGCGATAA GCTGACGGAA CGCCTGATCC GCGACGGCCG CTATGATCAT
GCGACGGCCT GCTTCGAATT CCTGCCGACC CGCGCCAAGC TCGACCTGCT CGGCTGGGAA
GAGGCCGATA TCTTCGCCCA TAGCTGA
 
Protein sequence
MAATIRYHEG DISAADAARY TGAIAIDTET LGLVPRRDRL CVVQLSPGDG TADIIRIAAG 
QKEARNLVAL LEDPTHQKIF HYGRFDIAVL FHTFGVTATP VFCTKIASRL IRTYTDRHGL
KDNLKEMLDV DVSKAQQSSD WAAERLSPAQ LEYAASDVLY LHALRDKLTE RLIRDGRYDH
ATACFEFLPT RAKLDLLGWE EADIFAHS