Gene Rleg_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4348 
Symbol 
ID8015123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4471840 
End bp4472916 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content63% 
IMG OID644826924 
ProductABC transporter related 
Protein accessionYP_002978127 
Protein GI241207031 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00012327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA GTGTCGTTCT TCAGAAGGTC GAGAAGCGCT ACGGCTCGCT GGATGTGATC 
CATGGCATCG ATCTGACGAT CGATCCCGGC GAATTCGTCG TTTTTGTCGG TCCCTCGGGC
TGCGGAAAAT CGACCCTTCT GCGCATGATC GCCGGTCTCG AGGAGATCAC CGGCGGCGGG
CTGCTGCTCG ACAACGAACG CATGAACGAG GTGGCGCCTG CCAAGCGCGG CATCGCCATG
GTCTTCCAGT CCTATGCGCT CTATCCCCAT ATGTCGGTCT ACAAGAACCT CGCCTTCGGC
CTGGAGACGG CGGGTTACAA GAAGGCCGAT ATCCAGCCGA AGGTGAAGCG CGCCGCCGAG
ATCCTGCAGA TCGAGAAGCT GCTGGAGCGC AAGCCGAAGG CGCTCTCCGG CGGCCAGCGC
CAGCGTGTCG CCATCGGCCG CGCCATCGTG CGCGAGCCGC GGATCTTCCT GTTCGACGAG
CCGCTGTCGA ACCTCGATGC CGAACTGCGC GTGCAGATGC GCGTCGAGAT CTCCCGCCTG
CATCGCAGCC TCGGCAATAC GATGATCTAT GTCACGCATG ACCAGGTCGA AGCCATGACG
ATGGCGGACA AGATCGTGGT GTTGAATTCC GGCCGCATCG AGCAGGTCGG CGCGCCGCTC
GATCTCTATA ACAACCCGGC CAACCGCTTC GTCGCCGGCT TCATCGGCAG CCCGAAGATG
AATTTTTTGA AGGCCCGCAT CGAGCAGGTC GGCGAGACCG AAACCAGCAT CCATGTCTGC
GGCAATTCCG TCCGCCTGCC GCGCCGGCTG AAAGGCGGAG CCGGAGAGGA GGTCACCTTC
GGCATCCGTC CCGAGCATCT TTCGCTGGCC GAAGGCGCAA TCGCGCTCTC GACCGTCAAC
GTCGATCTCG TCGAAAATCT CGGCGGCGCC ACCATGCTCT ACACCACGAC GCCGGATAAC
CAGCTCCTGA CCGTCGCGCT TGACGGCCAG CAGAAGGTGG AGCGCGGCGC CAATGTGAAG
GCTTCCTTCG ATCCGGCCCG CTGCCACGTC TTCGACGCGG CCGGCAAGAC GATCTAA
 
Protein sequence
MATSVVLQKV EKRYGSLDVI HGIDLTIDPG EFVVFVGPSG CGKSTLLRMI AGLEEITGGG 
LLLDNERMNE VAPAKRGIAM VFQSYALYPH MSVYKNLAFG LETAGYKKAD IQPKVKRAAE
ILQIEKLLER KPKALSGGQR QRVAIGRAIV REPRIFLFDE PLSNLDAELR VQMRVEISRL
HRSLGNTMIY VTHDQVEAMT MADKIVVLNS GRIEQVGAPL DLYNNPANRF VAGFIGSPKM
NFLKARIEQV GETETSIHVC GNSVRLPRRL KGGAGEEVTF GIRPEHLSLA EGAIALSTVN
VDLVENLGGA TMLYTTTPDN QLLTVALDGQ QKVERGANVK ASFDPARCHV FDAAGKTI