| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4325 |
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| Symbol | |
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| ID | 8015105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 4443002 |
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| End bp | 4445296 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644826901 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002978104 |
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| Protein GI | 241207008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.782007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0375955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA TTTCGAAACA AATCTTTGCG GCAGGCAGCG CCCTCGATCT GAGATCGGGC
ACTATTCCCT CCGCTGCCCC TTCGGAAGCG ACGATGACCG ATTTGTGCAT CTCGGCGATC
GACGAGGCGG TCGAGAACCT TCGCAGGCTG AGCGGTGCCG CTGCTTCGTC TGATGGCGGC
AAGCAGACGT CCGAAGCTGC AGCAACCGAG GCTGCCGATA CCGGACGCGC AAGCGCAACG
CAGGCGCCCC TCCCGGAAAA GACGGCGGTG CCGGAAGCTA AAGTGGAAAC GGCGCCTGCT
GTCGCGGTGG CGCAGGGCCC GGCGACAGCA AAACCGGCGG AAGCGCCGGC CCAGCCGCAG
ATCGAAGCAC GGGTGGCCCC CGAACTGCCG ACAGAGAAGA CCGAGCTTAA ATCGAGCCCG
ACGATGCCTT TCGGCAAGAC CATCGAAGGA GAAAGCGGTC CGATCAGCGA GAACGACAGG
CGGCTGCGCA CCGGCGGCGG CGGAAACGGC AAGAATTCCG ATCCCGGGGG CGGCGGGGGC
GGGGGCGGGG GAAGCGGCGG CGGTTTTCAC AAGCGCAGCG AGCCTGTGAA TTTCGCCGCC
AGCCTCTCGC GCGGGATGGT GGCGGTACGG CGCAACATGG TGGTCGTAAT GGTGTTTACG
GTCGCCATCA ACGTCCTTCT GCTGGCGATA CCGCTTTATC TCTTCCAGAT ATCCGACCGG
GTGCTGACAA GCCGCTCCGT CGACACGCTC GTCATGCTCT CGATCGCCGT GATCGGCGCC
GTGCTGCTGC AGGCCTTCAT GGATACGGTG CGGCGCTTTA TCCTGATGCG CACCGCGGTG
GAGCTCGAAG TTCAGCTCGG CGCGCCGATC CTCAGCGCCG CAGCGAGGGC GTCGCTGCAT
GGCAGCGGCA AGGATTATCA GACGCTGCAG GACCTGCAGC TTTTGCGCGG CTTCTTGACA
TCCGGCACGC TGATCGCGTT TCTCGATGCG CCGCTGATGC CGTTCTTCGT GGTCGTCGTC
TATTTCGTGC ATCCGCATCT CGGCATCATC ATCATGGTCT GCTGCGCGGT GCTTTTCGTG
ATCGCCTATC TGAACCAGAA ATTCACCGCC CGGCAATTTG CCGAATCCAA CGGCTATCTC
AGCCGGGCAA ATTTCCATCT CGATTCCATG TCGCGCAATT CGCAGATTAT CAACGCAATG
GCGATGATCC CCGAGGCGGT GAAGATGTGG GGCCGGGAAA CGGCGGGCTC GCTGAAATCG
CAAGTCGAAG CGCAAGACCG CAACATCATC TTCTCCGGCA TATCGAAGGC TTGCCGCATG
ATCACCCAGA TCACCCTGCT GGGCTGGGGT GCGCATCTGT CGCTCTCCGG TGAGTTGACG
GGCGGCATGG TGATTGCGTC CTCGATCATC TCGGGACGCG CCCTGGCGCC GATCGAAGGC
GCCATCGAAG GCTGGCATCA GTTCAACCGA TCGGCAGCCG CCTATGGCAG GATCAAAGGA
CTGCTGTTGA ACTCCCCATT GAACTTCCCG CGCCTGCGTC TTCCCAATCC CGAAGGCCGG
CTGGATGTCG AACGCATTCT CTTCGTGCCG CCGCCGCAGA AGAAGGTCAT TCTCAACGGC
ATCTCGTTCT CGCTCAGGAA GGGGGAATCA CTTGCGATCA TCGGTAATTC CGGGTCCGGC
AAGACGACGC TCGGCAAGAT GCTCGTCGGC TCGATCGTCC CGACATCGGG GAATGTTCGC
CTCGACCTGA TGGATCTGCG CAACTGGGAC CAGCGCCAGT TCGGCGAAAG CATCGGCTAT
CTGCCGCAGG ATGTGCAGCT CTTTCCCGGT ACGATCAAGG CCAATATCTG CCGCATGCGT
GACGACGTCG ACGATCACCA GATCTATGAG GCCGCTGTGC TCGCTGACGT GCACGAACTC
ATCGCAGGCT TCCCGCAGGG CTACGAAACA ATTGTGGCGG GTGACGGCGC TCCGCTTTCG
GGCGGCCAGA AGCAGCGCAT CGCGCTGGCC CGCGCCTTCT TCGGCAATCC GAAGTTCGTG
GTCCTCGACG AGCCGAACTC GAACCTCGAT ACACAAGGCG AGGCAGCTCT TGCCAAGGCG
CTGATACACG CCAAGAAGCA GGGCATCACC ACCGTCACCA TCACCCAGCG CCCGGCCCTT
CTCCAATGCG TCGACAAGAT CCTCGTGCTC AAGGAGGGTA CTGTCGCCAT GTTCGGGGAA
AGGATCGAGG TGCTGCAGGC GCTTTCCAAG AACAACGGCA ATAACGGTCA ACAAGCACCG
CGCATCGAGG GATGA
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| Protein sequence | MNQISKQIFA AGSALDLRSG TIPSAAPSEA TMTDLCISAI DEAVENLRRL SGAAASSDGG
KQTSEAAATE AADTGRASAT QAPLPEKTAV PEAKVETAPA VAVAQGPATA KPAEAPAQPQ
IEARVAPELP TEKTELKSSP TMPFGKTIEG ESGPISENDR RLRTGGGGNG KNSDPGGGGG
GGGGSGGGFH KRSEPVNFAA SLSRGMVAVR RNMVVVMVFT VAINVLLLAI PLYLFQISDR
VLTSRSVDTL VMLSIAVIGA VLLQAFMDTV RRFILMRTAV ELEVQLGAPI LSAAARASLH
GSGKDYQTLQ DLQLLRGFLT SGTLIAFLDA PLMPFFVVVV YFVHPHLGII IMVCCAVLFV
IAYLNQKFTA RQFAESNGYL SRANFHLDSM SRNSQIINAM AMIPEAVKMW GRETAGSLKS
QVEAQDRNII FSGISKACRM ITQITLLGWG AHLSLSGELT GGMVIASSII SGRALAPIEG
AIEGWHQFNR SAAAYGRIKG LLLNSPLNFP RLRLPNPEGR LDVERILFVP PPQKKVILNG
ISFSLRKGES LAIIGNSGSG KTTLGKMLVG SIVPTSGNVR LDLMDLRNWD QRQFGESIGY
LPQDVQLFPG TIKANICRMR DDVDDHQIYE AAVLADVHEL IAGFPQGYET IVAGDGAPLS
GGQKQRIALA RAFFGNPKFV VLDEPNSNLD TQGEAALAKA LIHAKKQGIT TVTITQRPAL
LQCVDKILVL KEGTVAMFGE RIEVLQALSK NNGNNGQQAP RIEG
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